EBG00000313339 - n.623C>T


Drug resistance types
5 Sensitive 18 RR-TB 4 HR-TB 31 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 58 Other
lineage Counts
lineage Count
lineage4.4.2 3
lineage2.2.1 39
lineage2.2.1.1 2
lineage3.1.2.1;lineage4.9 1
lineage3.1.1 3
lineage4.4.1.1 1
lineage4.1.2.1 3
lineage4.3.3 5
lineage3 2
lineage4.9 17
lineage4.1;lineage4.9 1
lineage4.2.1 6
lineage2 1
4
lineage4 2
La1.8.1 3
lineage4.8 4
lineage4.1.3 1
lineage2.2.2 4
lineage4.3.4.2.1 1
lineage3.1.3 1
La1.3 1
lineage4.1.1.3 1
lineage1.2.1.2 1
lineage6.1.1 1
lineage4.9;lineage4.4 2
lineage4.9;lineage1 2
lineage4.8.1 1
lineage1.2.1.1 1
lineage2.2.1;lineage4 1
lineage4.2.2.2 2
lineage4.3.2.1 1
lineage4.5 1
lineage3.1.1;lineage4.9 1
lineage4.3.4.1 1
lineage4.1.1.1 2
lineage4.4.1.1.1 1
lineage4.3.2 1
La3 1
lineage4.3.4.2 2
lineage4.1.2 1
lineage2.2;lineage4 1
lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 131
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR7069835 Other lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR10315567 HR-TB lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR16097544 Sensitive lineage4.1.2.1 None
SRR11342640 MDR-TB lineage4.3.3 None
ERR867567 RR-TB lineage3 None
ERR3797062 RR-TB lineage4.9 None
ERR10796597 Other lineage4.3.3 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR18003024 RR-TB lineage2.2.1 None
ERR867571 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR10796629 Other lineage4.1;lineage4.9 None
ERR867569 Other lineage4.9 None
SRR19303899 Other lineage3 None
10e7f087-a7d0-458d-9ba7-5e5d0e0384ec MDR-TB lineage4.2.1 None
2cb3c75e-c537-41fc-9889-83852660c29e RR-TB lineage2 None
a484d53f-623e-4c21-a305-e9271fc492b5 Sensitive None
4d7dfdc1-e6b6-4646-9fc2-df1f813b8cc3 RR-TB lineage4 None
SRR1792022 Other La1.8.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR7131123 Other lineage4.8 None
SRR7131147 Other lineage4.1.2.1 None
ERR10796628 Other lineage4.3.3 None
SRR21727760 Other lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR2027220 Sensitive lineage3.1.3 None
ERR4769436 Other La1.3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR10796560 Other lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR867540 MDR-TB lineage2.2.1 None
SRR3675509 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR3675389 Other lineage4.9 None
SRR7131195 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR1792011 Other La1.8.1 None
95bec0f0-0db0-4add-8874-46a2a473a911 Other lineage1.2.1.2 None
1a53fae0-ad6e-47d9-8ba3-621f93a1dcd6 Other lineage4.9 None
8f9d7d60-b4f0-40b8-9920-e84bf1f8991a MDR-TB lineage6.1.1 None
0dee6c84-9abb-471f-96ea-e14ad7ef6625 Other lineage4.9;lineage4.4 None
78cd8622-ae14-4ede-836f-3c46653b25d2 MDR-TB lineage4.2.1 None
203d04f3-c6dc-41a8-a217-844b40911a7c Other lineage4.9 None
9a4d7511-20d5-499b-948a-3d8412d8f470 Pre-XDR-TB lineage2.2.1 None
23c9934f-9243-4ab0-b60d-92a6dd78e16e Pre-XDR-TB lineage2.2.1 None
8fcf9e86-5ed1-4a9e-9734-73cc6c816138 Other lineage4.3.3 None
2fda480b-db69-46cb-b2b2-dea440709cd7 Other None
af96ed13-2f00-4890-9a10-d5e5321c2eb6 Pre-XDR-TB lineage2.2.1 None
8d57ef01-e8b8-40ac-8567-578de617f6db Other lineage4.9;lineage4.4 None
111554bd-7e57-4c39-bd48-ab5cbb5a2fb7 MDR-TB lineage2.2.1 None
52d6fe2b-0a06-42e1-941a-e2c131f3c0de Other None
cbfe5427-cd17-4da4-afd3-e90e97dcd2ff RR-TB lineage4.9;lineage1 None
746b7a11-280b-4013-a4cf-2cd1334ae79a RR-TB lineage4.9;lineage1 None
fc61013e-6971-41d1-8990-22b7d5b2fe83 Other None
SRR11342662 MDR-TB lineage4.8.1 None
SRR7069922 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR16156697 RR-TB lineage2.2.1 None
SRR18002974 Other lineage2.2.1 None
SRR11342669 Other lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR18002976 Other lineage2.2.1 None
ERR5087596 Other La1.8.1 None
SRR19304104 Other lineage4.8 None
ERR3283032 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
ERR867538 Other lineage4.2.2.2 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
abd3fa23-4036-49c8-af54-419e0c2c7cb9 Sensitive lineage4.3.2 None
1f6b2f48-89c7-4fe4-9fa0-5eba488905dd Other lineage4.9 None
78d8d552-ced1-4f4d-bcc2-07802902985e RR-TB lineage4.9 None
17e9d534-2d02-419a-a2fc-255d2941b89e Pre-XDR-TB lineage4.2.1 None
0a1b7ec4-4703-436e-a37f-96c4d6891fae Other La3 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR3675265 Other lineage4 None
SRR9970980 HR-TB lineage4.1.2 None
ERR10219876 Other lineage4.3.4.2 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR867573 Other lineage4.9 None
SRR11342691 MDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR18002994 MDR-TB lineage4.2.2 None