EBG00000313339 - n.623C>T
Drug resistance types
5 Sensitive
13 RR-TB
3 HR-TB
27 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 4 |
| lineage2.2.1 | 35 |
| lineage4.9 | 13 |
| lineage3 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 2 |
| lineage3.1.1 | 3 |
| lineage4.4.2 | 2 |
| lineage4.2.1 | 3 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.8 | 4 |
| lineage4 | 1 |
| La1.3 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1.1 | 2 |
| La1.8.1 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.3.3 | 4 |
| lineage4.2.2.2 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR13291544 | Sensitive | lineage4.1.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR3675389 | Other | lineage4.9 | None | SRR19304104 | Other | lineage4.8 | None | ERR867572 | Other | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | ERR13291584 | Sensitive | lineage4.1.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR16097544 | Sensitive | lineage4.1.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1792022 | Other | La1.8.1 | None | ERR867571 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None |
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