lineage | Count |
---|---|
lineage4.9 | 18 |
lineage3.1.1 | 1 |
lineage2.2.1 | 8 |
lineage4.8 | 3 |
6 | |
lineage4.1.2.1 | 4 |
lineage4.3.3 | 2 |
lineage3 | 4 |
lineage3.1.2.1 | 1 |
lineage1 | 1 |
lineage1.1.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.1.3.1 | 3 |
lineage4.8.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4.4.2 | 1 |
La1.8.1 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR212034 | HR-TB | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4814700 | Other | lineage4.3.3 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4817069 | RR-TB | None | ERR4816756 | RR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4819012 | Other | lineage1.1.2 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | SRR8217918 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None |
---|