EBG00000313325 - n.592T>G
Drug resistance types
26 Sensitive
28 RR-TB
4 HR-TB
20 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 11 |
| lineage2.2.1 | 22 |
| La2 | 1 |
| lineage4.9 | 30 |
| lineage4.5 | 1 |
| lineage3 | 11 |
| lineage2.2.1.1 | 2 |
| lineage6 | 3 |
| lineage1.1.2 | 2 |
| lineage4 | 6 |
| lineage4.3.3 | 3 |
| lineage3;La1.1 | 1 |
| La1.1 | 9 |
| 4 | |
| lineage2.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage3.1 | 1 |
| lineage4.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.7 | 1 |
| lineage4.3.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.6 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMEA3501015 | Other | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19304094 | Other | lineage6 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR161071 | Sensitive | lineage3;La1.1 | mw | ERR181980 | Sensitive | La1.1 | mw | SRR5818419 | Sensitive | None | SRR3675509 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR161044 | Sensitive | La1.1 | mw | SRR3675230 | RR-TB | lineage3 | None | SRR3675265 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR4816971 | HR-TB | lineage4.3.4.1 | None | ERR4815994 | Other | lineage3 | gb | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR212091 | Sensitive | La1.1 | mw | ERR2229198 | MDR-TB | lineage4.8 | None | SRR5818426 | Other | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818458 | Other | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5818445 | Other | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820184 | MDR-TB | lineage3 | gb | SRR5818399 | Sensitive | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | ERR2815611 | Sensitive | La1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046534 | Other | lineage1.1.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR8065076 | Sensitive | La1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR8065072 | Sensitive | La1.1 | None | SRR8065077 | Sensitive | La1.1 | None | SRR8065083 | Sensitive | La1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR8065075 | Sensitive | La1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR3797065 | MDR-TB | lineage4 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR3806588 | Other | lineage6 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5979789 | Other | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9117788 | Other | lineage3 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315567 | Other | lineage2.2.1 | None |
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