lineage | Count |
---|---|
lineage2.2.1 | 9 |
lineage4.9 | 48 |
lineage2.2.2 | 2 |
lineage4.8.1 | 2 |
lineage4.3.4.2 | 2 |
lineage4.8 | 3 |
lineage4.1.2.1 | 2 |
lineage3.1.2.1;lineage4.9 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1;lineage4.9 | 1 |
lineage4.3.3 | 3 |
lineage3 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.1.3 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.1 | 2 |
lineage4.7 | 1 |
lineage4.2.2.2 | 2 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR5818393 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR5818460 | Other | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR5818445 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR5818437 | RR-TB | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR5818452 | Other | lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818411 | RR-TB | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR5818385 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR1063855 | Other | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | SRR5818458 | Other | lineage4.9 | None | SRR5818426 | Other | lineage4.9 | None | SRR5818413 | Sensitive | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR5818440 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5818446 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4.7 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None |
---|