SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
SRR1013530
|
Other
|
lineage4.9.1
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
SRR14334194
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6832644
|
Other
|
lineage4.3.3;lineage4.9
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR1062865
|
Sensitive
|
lineage2.2.2
|
None
|
SRR1173777
|
Sensitive
|
lineage4.9
|
None
|
ERR4819864
|
RR-TB
|
lineage1.1.3.1
|
None
|
SRR5709926
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4815556
|
RR-TB
|
lineage3
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
ERR4831618
|
MDR-TB
|
lineage2.1
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR9786911
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4816322
|
Other
|
lineage4.9
|
None
|
ERR10762275
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR9786597
|
Other
|
lineage4.6.2.2
|
None
|
ERR3283046
|
Sensitive
|
lineage4.9
|
None
|
ERR1023494
|
Sensitive
|
lineage3
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
ERR4815022
|
Other
|
lineage3.1.2.1
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR18511647
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
ERR4872269
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
ERR4769495
|
Other
|
La1.3
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
SRR1183067
|
Other
|
lineage4.9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR4812763
|
Other
|
lineage2.2.1
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
ERR11049390
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1062868
|
Sensitive
|
lineage4.3.2.1;lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4769418
|
Other
|
La1.2
|
None
|
ERR4820394
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR6131515
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR6044952
|
Other
|
lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
SRR21240055
|
Other
|
lineage4.1.2.1
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
SRR11342668
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
SRR7645936
|
Sensitive
|
lineage2.2.1
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18002941
|
RR-TB
|
lineage2.2.1
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR4769423
|
Other
|
La1.3
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156775
|
Other
|
lineage4.9
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR1013532
|
Sensitive
|
lineage4.3.2;lineage4.9
|
None
|
ERR4817171
|
RR-TB
|
lineage4.1.2.1
|
gb
|
ERR4817664
|
Sensitive
|
lineage4.1.2.1
|
gb
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
ERR4816852
|
Other
|
lineage4.9
|
None
|
SRR13888750
|
Other
|
La2
|
None
|
SRR1062869
|
Sensitive
|
lineage4.9.1
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796351
|
Sensitive
|
lineage4.9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
SRR20969475
|
Other
|
lineage1.2.1.2
|
None
|
ERR4817189
|
Other
|
lineage4.7
|
None
|
SRR7236330
|
Other
|
La1.8.1
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4820586
|
Other
|
lineage3
|
gb
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR9992784
|
XDR-TB
|
lineage2.2.2
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
ERR400443
|
Sensitive
|
lineage1.2.1.2.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR3806850
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
SRR1173568
|
Sensitive
|
lineage4.9
|
None
|
SRR1013527
|
Other
|
lineage2.2.1
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
ERR9029360
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR5007169
|
RR-TB
|
lineage4.8.2
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
ERR4811708
|
HR-TB
|
lineage4
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR400350
|
Sensitive
|
lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|