Rv0668 - c.1254C>G
Drug resistance types
59 Sensitive
31 RR-TB
20 HR-TB
23 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 9 |
| lineage4 | 35 |
| lineage4.9 | 39 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.7 | 2 |
| lineage4.6 | 1 |
| lineage3 | 13 |
| lineage4.4.1.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.4.1 | 1 |
| 20 | |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 3 |
| lineage3.1.2.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage1.1.2 | 5 |
| lineage2.2.1 | 17 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.3 | 5 |
| lineage2.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 2 |
| lineage4.3 | 2 |
| lineage4.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.3 | 4 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| La1 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2 | 5 |
| lineage2.2.2 | 2 |
| lineage4.9;lineage2.2.1 | 2 |
| La2 | 1 |
| La1.4 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229234 | RR-TB | lineage4.8 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2513054 | Other | lineage4.2.2.2 | None | ERR4817171 | Sensitive | lineage4.1.2.1 | gb | ERR4817189 | Other | lineage4.7 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816852 | Other | lineage4.9 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2512832 | Other | lineage4.3.4.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4817664 | Sensitive | lineage4.1.2.1 | gb | SRR5341396 | Other | lineage4 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR4820784 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR2515032 | Other | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4820586 | Other | lineage3 | gb | SRR5341303 | RR-TB | lineage4 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR5341469 | Other | lineage4 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045892 | Sensitive | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821655 | Sensitive | lineage4 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046815 | Other | lineage3 | None | SRR6046737 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR9970980 | Other | lineage4.1.2 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR1023494 | Sensitive | lineage3 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796630 | HR-TB | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR323115 | Sensitive | lineage4 | None | ERR11049390 | Sensitive | lineage4.1.2.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR4024991 | Other | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR4769423 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4797474 | Other | None | ERR4769472 | Other | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4811708 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6866639 | Other | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR1013530 | HR-TB | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1106670 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1172873 | MDR-TB | lineage1.1.2 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1169473 | Sensitive | lineage1.1.2 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173777 | Other | lineage4 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR13888750 | Other | La2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR3105762 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814623 | Other | lineage4.8 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4814841 | Other | lineage4.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816944 | RR-TB | lineage2.2 | None | ERR4817069 | RR-TB | None |
|---|
