Rv0668 - c.1254C>G


Drug resistance types
25 Sensitive 24 RR-TB 51 HR-TB 23 MDR-TB 10 Pre-XDR-TB 2 XDR-TB 54 Other
lineage Counts
lineage Count
lineage4.9 68
lineage4.8;lineage4.9 2
lineage3 5
lineage4.1.2.1 6
lineage2.2.2 3
lineage2.2.1 24
M.canetti;lineage4.9;lineage9 1
lineage4.6.2.2 2
lineage4.2.1 1
La1.2.BCG 1
La1.8.1 4
lineage2.2.1.2 1
lineage4.8.2 1
lineage4.4.1.1 1
lineage4.8 7
lineage4.9;lineage6.1.3 1
lineage1.1.3.1 2
lineage4.3.3 6
lineage4.3.4.2.1 3
M.canetti;lineage1 1
lineage1.2.2.2 1
La1.3 2
lineage4.9.1 2
lineage4.4.1.1.1 2
lineage4.3.2.1;lineage4.9 1
lineage4.1.1.3.1 2
lineage3.1.3 1
lineage4.3.4.2 1
lineage3.1.2.1 1
lineage1.2.1.1 1
lineage4.3 1
lineage4.8.1 3
lineage4 2
lineage4.1.1.1 1
lineage1.1.2 1
La2 1
lineage1.2.1.2.1 1
lineage2.2.1;lineage4.5 1
lineage4.1.1.3 3
lineage4.7 1
lineage4.3.2.1 2
lineage2.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.2 1
lineage4.3.3;lineage4.9 1
La1.4 1
lineage3;lineage4.9 1
2
lineage3.1 1
lineage4.1.2 2
lineage4.2.2.2 1
lineage6.1.3 1
lineage4.3.2;lineage4.9 1
lineage4.4.2 1
lineage1.2.1.2 1
lineage4.1.1.3;lineage4.9 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 189
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR11049390 Sensitive lineage4.1.2.1 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9786597 Other lineage4.6.2.2 None
SRR6044952 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR779852 HR-TB lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR1159378 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
ERR3283046 Sensitive lineage4.9 None
ERR4815556 RR-TB lineage3 None
ERR6866639 HR-TB lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR18511647 Sensitive lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR5341384 HR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR4817664 Sensitive lineage4.1.2.1 gb
ERR978765 RR-TB lineage4.8 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR323066 HR-TB lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6511621 HR-TB lineage4.9 None
ERR4812763 Other lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR4769495 Other La1.3 None
SRR1013530 Other lineage4.9.1 None
SRR5341453 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR7236330 Other La1.8.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR1173777 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
SRR1062868 Sensitive lineage4.3.2.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR502511 HR-TB lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR6358979 HR-TB lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR18002941 RR-TB lineage2.2.1 None
ERR702405 HR-TB lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4815022 Other lineage3.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SAMEA3501073 RR-TB lineage4.8 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR4769423 Other La1.3 None
ERR3275941 RR-TB lineage4.3 nl
ERR323115 Sensitive lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
ERR4811708 HR-TB lineage4 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1062869 Sensitive lineage4.9.1 None
ERR2229198 Sensitive lineage4.8 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR7236177 Other La1.8.1 None
ERR124636 HR-TB lineage4.9 None
SRR13888750 Other La2 None
ERR400443 Sensitive lineage1.2.1.2.1 None
SRR5341308 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR1180996 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4796351 Sensitive lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR5311077 Other La1.8.1 None
ERR4817189 Other lineage4.7 None
ERR4796254 Other lineage4.9 None
ERR4821704 Other lineage4.3.3 None
ERR978767 RR-TB lineage4.8 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4831618 MDR-TB lineage2.1 None
SRR12416842 HR-TB lineage4.9 None
ERR1023494 Sensitive lineage3 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4769418 Other La1.2 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1013527 Other lineage2.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR4820586 Other lineage3 gb
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR1063896 HR-TB None
ERR4817069 RR-TB None
SRR28351442 HR-TB lineage3.1 None
ERR137286 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR7645936 Sensitive lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR5341298 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR10315466 RR-TB lineage2.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR11342682 Other lineage4.1.2 None
ERR9787256 Other lineage6.1.3 None
ERR4820394 Sensitive lineage4.3.4.2.1 None
SRR1013532 Sensitive lineage4.3.2;lineage4.9 None
ERR4817171 RR-TB lineage4.1.2.1 gb
ERR4872269 XDR-TB lineage2.2.1 None
ERR1063883 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR20969542 Other lineage4.4.2 None
SRR12708414 HR-TB lineage2.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR9029360 MDR-TB lineage2.2.1 None
SRR1183067 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400350 Sensitive lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR3675585 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR12708409 HR-TB lineage4.3.3 None
SRR6131515 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR19295647 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR1062865 Sensitive lineage2.2.2 None
ERR4797184 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None