EBG00000313325 - n.842_844delATCinsTTT
Drug resistance types
0 Sensitive
5 RR-TB
1 HR-TB
6 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 1 |
| lineage2.2.1 | 8 |
| lineage4.9 | 4 |
| lineage3.1.2 | 3 |
| lineage4.7 | 1 |
| lineage3 | 8 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069800 | Other | lineage3.1.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | SRR18213726 | Other | lineage3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR6046729 | Other | lineage3 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045110 | Other | lineage3 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR7069074 | Other | lineage3 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR6045726 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR6046291 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR7070461 | Other | lineage3 | None | SRR18002933 | Other | lineage2.2.1 | None |
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