EBG00000313325 - n.1106T>C
Drug resistance types
18 Sensitive
3 RR-TB
1 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1 | 8 |
| lineage6.2.3 | 1 |
| lineage4.8.1 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.4.1.1 | 4 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.8 | 3 |
| La1.3 | 4 |
| lineage4.9 | 14 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.3 | 4 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2100532 | Sensitive | lineage3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6982516 | Sensitive | lineage4.4.1.1 | None | ERR10796625 | Other | lineage4.4.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342680 | Other | lineage4.8 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR4769514 | Other | La1.3 | None | SRR1183306 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1183716 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4796888 | Sensitive | lineage3 | in | SRR2101532 | Sensitive | lineage4.4.1.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR9786817 | Sensitive | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR10796559 | Other | lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796594 | Other | lineage4.9 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | ERR4769552 | Sensitive | La1.3 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR1183341 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1181221 | Other | lineage4.9 | None | SRR1181495 | Sensitive | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4769408 | Other | La1.3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR228175 | Sensitive | lineage3 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1183614 | Sensitive | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | SRR5073729 | Sensitive | lineage4.8 | vn |
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