EBG00000313325 - n.1106T>C
Drug resistance types
20 Sensitive
6 RR-TB
6 HR-TB
5 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.4 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.1.2.1 | 13 |
| lineage2.2.1 | 8 |
| lineage3 | 12 |
| lineage4.4.1.1 | 6 |
| lineage2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.8 | 4 |
| lineage4.3.3 | 6 |
| lineage1.2.2.2 | 1 |
| lineage1.1.2 | 3 |
| lineage4.6.3 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 2 |
| lineage6.2.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.7 | 3 |
| lineage4.1.1 | 3 |
| lineage4.9 | 12 |
| lineage3.1.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| 1 | |
| La1.3 | 6 |
| lineage4.9;La1.3 | 2 |
| lineage4.8.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 117 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR11972223 | MDR-TB | lineage2.2.1.1 | None | SRR12142391 | Sensitive | lineage4.4 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR2101532 | Sensitive | lineage4.4.1.1 | None | ERR4814442 | Other | lineage4.4.1.1 | None | SRR22175269 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025656 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815103 | Other | lineage3 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR4815779 | Other | lineage4.3.4.2 | None | ERR4814623 | Other | lineage4.8 | None | ERR1750906 | Sensitive | lineage4.3.3 | za | ERR3275866 | Other | lineage4.1.2.1 | nl | ERR4814700 | Other | lineage4.3.3 | None | ERR4816955 | Other | lineage4.3.3 | gb | ERR4815517 | Other | lineage1.2.2.2 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4817368 | Other | lineage4.6.3 | None | ERR4816883 | Other | lineage4.5 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4817129 | HR-TB | lineage4.1.2.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR228175 | Sensitive | lineage3 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818208 | Other | lineage4.1.1.3.1 | gb | ERR4819380 | Sensitive | lineage3 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818869 | Other | lineage4.2.2.2 | None | SRR5073729 | Sensitive | lineage4.8 | vn | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR2513628 | Other | lineage4.1.2.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818471 | Other | lineage2.2.1 | None | ERR4818538 | Other | lineage3 | gb | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819131 | Other | lineage4 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR2515007 | Other | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2515011 | Other | lineage4.1.2.1 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821561 | HR-TB | lineage4.6.2.2 | None | ERR4821953 | Other | lineage4.7 | gb | ERR4821407 | Other | lineage4.3.4.2 | None | ERR4821516 | Other | lineage3 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4822093 | Sensitive | lineage4.1.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045992 | Other | lineage3 | None | SRR6045164 | Other | lineage4.1.2.1 | None | SRR6046275 | Other | lineage3.1.1 | None | ERR4828217 | Other | lineage2.2.1 | vn | SRR6046291 | Other | lineage3 | None | SRR6982516 | Sensitive | lineage4.4.1.1 | None | SRR6046891 | Other | lineage4.7 | None | ERR3148546 | Other | lineage4.3.2 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | SRR6785282 | Other | lineage4.3.3 | None | SRR6046790 | Other | lineage4.7 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR3283041 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796630 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR405191 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR4769552 | Other | La1.3 | None | ERR4796888 | Sensitive | lineage3 | in | ERR6197022 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR4769555 | Other | La1.3 | None | ERR4796479 | XDR-TB | lineage2.2.1 | in | ERR4800222 | Sensitive | lineage1.1.2 | None | ERR9786817 | Sensitive | lineage4.1.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117725 | Other | lineage4.1.1 | None | SRR10315473 | MDR-TB | lineage4.8.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062941 | MDR-TB | lineage4.6.1.2 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None |
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