EBG00000313339 - n.615C>T
Drug resistance types
12 Sensitive
25 RR-TB
4 HR-TB
16 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
89 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 4 |
| lineage6.1.3 | 1 |
| lineage4.1.2.1 | 10 |
| 4 | |
| lineage3 | 22 |
| lineage4.8 | 7 |
| lineage4.6.2.2 | 2 |
| lineage4.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9 | 14 |
| lineage4 | 8 |
| lineage3.1.1 | 6 |
| lineage1.1.2 | 5 |
| lineage3.1.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.4.1.1 | 7 |
| lineage4.3.1.1 | 3 |
| lineage4.6.5 | 1 |
| lineage2.2.1 | 13 |
| lineage4.3.4.1 | 3 |
| lineage4.3.3 | 4 |
| lineage4.3.2 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1 | 2 |
| lineage4.3 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1.4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.6 | 1 |
| lineage2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 151 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821214 | RR-TB | None | ERR4822104 | RR-TB | lineage3 | None | ERR4822021 | Other | lineage4.8 | gb | ERR4822085 | Other | lineage4.8 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045743 | Other | lineage3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044904 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045379 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046064 | Other | lineage3 | gb | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR7131028 | Other | lineage4.8 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6367397 | Other | lineage4.1.2.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046815 | Other | lineage3 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796627 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR117670 | MDR-TB | lineage4.6.1 | None | ERR10796635 | Other | lineage4 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117729 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117759 | Other | lineage3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117788 | Other | lineage3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9901813 | RR-TB | lineage4.1.4 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR2100234 | MDR-TB | lineage4.6.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR22048377 | Sensitive | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814416 | HR-TB | lineage1.1.2 | gb | ERR3276130 | Sensitive | lineage1.1.2 | nl | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675234 | Other | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675288 | Other | lineage3 | None | ERR4815101 | Other | lineage3 | gb | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4816015 | HR-TB | lineage4.4.1.1 | None | ERR4815901 | Other | lineage2.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR4033509 | Sensitive | lineage4.3.2.1 | za | ERR4817708 | Sensitive | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4819324 | Other | lineage4.8 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820161 | Other | lineage3 | None | ERR4820604 | Other | lineage4.1.1.3 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045432 | Other | lineage3 | gb |
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