EBG00000313339 - n.615C>T
Drug resistance types
8 Sensitive
5 RR-TB
1 HR-TB
13 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage3 | 6 |
| lineage2.2.1 | 8 |
| lineage4.4.1.1.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 6 |
| lineage2.2.2 | 2 |
| lineage4.6 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.3 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8 | 5 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 64 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7069800 | Other | lineage3.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070329 | Other | lineage3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR867544 | Other | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR18213736 | Other | lineage3 | None | SRR6044936 | Other | lineage4.6 | None | ERR3276130 | Sensitive | lineage1.1.2 | nl | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6044904 | Other | lineage3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR21690828 | Sensitive | lineage1.1.2 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7069137 | Other | lineage4.8 | None | ERR9117788 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None | ERR10796635 | Other | lineage4.8 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR10796599 | Other | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR5007165 | Other | lineage3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR6046815 | Other | lineage3 | None |
|---|
