lineage | Count |
---|---|
lineage4.6.1.2 | 5 |
lineage3 | 3 |
lineage4.8 | 4 |
lineage4.5 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.1 | 1 |
lineage4.1.1.3.1 | 2 |
lineage4.9 | 14 |
lineage4.8.2 | 1 |
lineage4.3.3 | 1 |
lineage2.2.1 | 6 |
lineage4.3.4.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4 | 3 |
La1.7.X-unk4 | 1 |
La1.3 | 1 |
lineage4.3.2 | 1 |
3 | |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 52 |
ID | Drug resistance | Lineage | Country iso2 | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816470 | Other | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4819910 | Other | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR16157123 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR11081280 | MDR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815310 | Other | None | ERR4815550 | Other | lineage4 | None | SRR3675502 | Other | None |
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