EBG00000313325 - n.603T>C


Drug resistance types
36 Sensitive 17 RR-TB 18 HR-TB 26 MDR-TB 13 Pre-XDR-TB 1 XDR-TB 88 Other
lineage Counts
lineage Count
lineage4.9 68
lineage1.1.1 2
lineage2.2.1 22
lineage4.9;lineage9 1
lineage6.1.3 2
lineage2.2.1;lineage4.9 1
lineage4.1 1
lineage3.1.2 1
lineage4.6.1.1 2
lineage4.8.1 1
La1.7;lineage4.9 2
La1.3 5
lineage4.1.2.1 5
lineage4.1.1.3 7
La1.8.1 3
lineage4.8 10
lineage3 7
lineage4.9;lineage7 2
lineage2.1;lineage4.9 2
lineage2.2.1.1 2
lineage4.4.2 2
La1.2;La1.8.1 1
La2 1
M.canetti;lineage1 1
lineage1.2.2.2 1
La3;lineage4.9 1
lineage4.2.1 2
lineage2.2.2 4
La1.2 1
lineage4.2.2.2 2
lineage4.3.3 6
M.canetti;lineage4.9;lineage9 1
lineage4.1.1.2 1
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1;lineage4 1
lineage3.1.2.1 1
lineage6.1.2 1
lineage4.4.1.1 3
La3;lineage4.3.4 1
La1;lineage4.9 1
La1.4 1
lineage4.2.1.1;lineage4.3.3 1
lineage1.2.1.1 1
lineage4.1.2;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage4.1.1.1 1
lineage1.1.2 1
lineage2.2;lineage4.9 1
lineage4.1.2 1
lineage4.2.2 1
lineage4.7 1
lineage4.3.4.2.1 1
lineage4 1
lineage4.3.4.1 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.1.2 1
lineage4.3.2.1 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 199
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5818425 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR5818459 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1023236 Other lineage6.1.3 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR4815502 Other lineage4.1 None
ERR3283021 MDR-TB lineage4.9 None
ERR2027250 Other lineage3.1.2 None
ERR867569 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR5818428 Sensitive lineage4.9 None
SRR5818470 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR369151 Other lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR4822138 Other lineage4.1.2.1 None
SRR7069837 Sensitive lineage4.1.1.3 None
SRR7069391 Other lineage4.9 None
ERR3283046 Sensitive lineage4.9 None
SRR7617847 Other La1.8.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4816322 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR867574 Other lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR867573 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR20969542 Other lineage4.4.2 None
SRR7240033 Other La1.2;La1.8.1 None
ERR867526 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR3675582 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR867570 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR181744 HR-TB La3;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4769474 HR-TB lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR5818424 Sensitive lineage4.9 None
SRR5818455 Sensitive lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
ERR867567 RR-TB lineage3 None
ERR363509 Sensitive lineage4.9 None
ERR4769418 Other La1.2 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
ERR867538 Other lineage4.2.2.2 None
ERR4814905 Sensitive lineage4.8 gb
ERR369156 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR10796632 Other lineage4.3.3 None
SRR5818414 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
SRR7069473 Other lineage4.1.1.2 None
SRR12708418 HR-TB lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4769493 Other lineage4.9 None
SRR5818394 Other lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR3806588 Other lineage6.1.3 None
ERR867575 Other lineage4.9 None
ERR3077969 Other La1.3 None
ERR4819314 HR-TB lineage1.1.1 None
ERR9787033 Sensitive lineage6.1.2 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR5818449 MDR-TB lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4816868 Other lineage4.4.1.1 None
SRR11342686 MDR-TB lineage4.8 None
ERR4769514 Other La1.3 None
SRR6046250 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4821769 Other lineage4.1.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR867572 Other lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR6045371 Other lineage4.9 None
SRR5818389 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5818466 Other lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
ERR4820193 Other lineage3 None
SRR5818415 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR2886463 Sensitive lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
ERR4810544 Sensitive lineage2.2.1 cn
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR16278274 Other La1.4 None
ERR867571 Other lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR5818452 Other lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5818397 Other lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR2514215 Other lineage2.2.1 gb
ERR4819175 Other lineage4.1.1.3 gb
ERR373945 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR5818388 Other lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR5818400 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR21240055 Other lineage4.1.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
SRR3675552 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
SRR8651616 MDR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR387051 RR-TB lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR4816571 Sensitive lineage1.1.2 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR6045267 RR-TB lineage4.8 None
SRR11342682 Other lineage4.1.2 None
ERR2446509 Other lineage3 nl
DRR188816 Other lineage4.2.2 None
ERR2503533 Other lineage4.1.2.1 fi
SRR5818399 Sensitive lineage4.9 None
ERR4829360 Sensitive lineage4.7 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
SRR5818386 Other lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR3675245 Other lineage4.1.2.1 None
SRR22424787 Sensitive lineage4.9 None
SRR18003031 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR5818413 Sensitive lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR20969475 Other lineage1.2.1.2 None
SRR12420628 MDR-TB lineage2.2.1 None
ERR3275190 Other lineage3 nl
SRR5818421 Sensitive lineage4.9 None
SRR5818391 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
DRR184982 Other lineage2.2.1 None
SRR5074711 Sensitive lineage4.3.3 None
ERR978767 RR-TB lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR4769552 Sensitive La1.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4818272 Other lineage4.3.2 None
SRR7236399 Other La1.8.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None