EBG00000313325 - n.603T>C
Drug resistance types
36 Sensitive
17 RR-TB
18 HR-TB
25 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
88 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 68 |
| La1.3 | 5 |
| lineage4.3.3 | 6 |
| lineage3 | 7 |
| lineage1.1.3.1 | 1 |
| La1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1 | 21 |
| lineage4.1.1.3 | 7 |
| lineage6.1.3 | 2 |
| La1.4 | 1 |
| lineage4.6.1.1 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.8 | 10 |
| lineage2.2.1.1 | 2 |
| lineage1.1.1 | 2 |
| lineage4.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.2 | 4 |
| lineage1.2.2.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.4.1.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.2 | 1 |
| La1.8.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.1.2.1 | 5 |
| lineage3.1.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage4.3.4.1 | 1 |
| La2 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SRR5818424 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5818408 | Other | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR16278274 | Other | La1.4 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR5818388 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR5818394 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069391 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR3077969 | Other | La1.3 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR867574 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | DRR188816 | Other | lineage4.2.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR5818386 | Other | lineage4.9 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR6045371 | Other | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR3275190 | Other | lineage3 | nl | SRR5818389 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5818466 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | DRR184982 | Other | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR5818459 | Other | lineage4.9 | None | ERR4810544 | Sensitive | lineage2.2.1 | cn | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR867569 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR5818414 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR5818400 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR7069837 | Sensitive | lineage4.1.1.3 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR867575 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR4829360 | Sensitive | lineage4.7 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR3675582 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SRR5818460 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR7236399 | Other | La1.8.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR10808730 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4816852 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR7617847 | Other | La1.8.1 | None | SRR3675552 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR5818399 | Sensitive | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4769514 | Other | La1.3 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4798823 | HR-TB | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR5818413 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR867572 | Other | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
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