EBG00000313339 - n.745T>C
Drug resistance types
60 Sensitive
54 RR-TB
32 HR-TB
35 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 48 |
| lineage2.2.1 | 32 |
| La2 | 1 |
| La1.4 | 1 |
| lineage4.9 | 87 |
| lineage2.2.2 | 3 |
| lineage4.8 | 20 |
| lineage4.1.2 | 4 |
| lineage3 | 15 |
| lineage1.1.1 | 2 |
| lineage3.1.2 | 3 |
| lineage4.4.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4 | 16 |
| lineage4.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage3.1 | 1 |
| 5 | |
| lineage4.3.3 | 9 |
| lineage4.6.1.2 | 5 |
| lineage4.7 | 2 |
| lineage4;lineage2 | 1 |
| lineage1 | 2 |
| lineage5.1.3 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4.4.1.1 | 4 |
| lineage1.1.2 | 1 |
| lineage6 | 2 |
| lineage4.8.2 | 1 |
| lineage4.3.4.2.1 | 8 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.5 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.8.1 | 1 |
| La1.3 | 7 |
| La1.8.1 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage5.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 327 |
Geographic prevalence
Country level data for this variant is available for 40 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR16278274 | Other | La1.4 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR2099971 | HR-TB | lineage4.1.2 | None | SRR2100532 | Sensitive | lineage3 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR2100773 | Sensitive | lineage3.1.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR24035891 | Sensitive | lineage4.1.2.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR4815261 | Other | lineage4.8 | gb | ERR4814362 | Other | lineage4.8 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR2099787 | RR-TB | lineage4.1.2.1 | es | ERR4814681 | Other | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4815467 | Other | lineage3 | None | ERR2099781 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR4814821 | Other | lineage2.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR2099789 | MDR-TB | lineage4.1.2.1 | es | ERR4814986 | Other | lineage4.3.4.2 | None | ERR2099788 | MDR-TB | lineage4.1.2.1 | es | ERR4815889 | Sensitive | lineage4.9 | None | ERR4816549 | Other | lineage2.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2099778 | RR-TB | lineage4.1.2.1 | es | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4817060 | RR-TB | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR2099791 | MDR-TB | lineage4.1.2.1 | es | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR2229628 | Sensitive | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816907 | Other | lineage1.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818988 | Other | lineage1 | None | ERR4817735 | Other | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR228175 | Sensitive | lineage3 | None | ERR2099775 | RR-TB | lineage4.1.2.1 | es | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2512532 | Other | lineage5.1.3 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR2099776 | MDR-TB | lineage4.1.2.1 | es | ERR4818208 | Other | lineage4.1.1.3.1 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2099782 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR2099777 | MDR-TB | lineage4.1.2.1 | es | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818574 | Other | lineage6 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4819198 | Other | lineage2.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819307 | RR-TB | lineage4 | None | ERR2513976 | Other | lineage4.8 | gb | ERR4819868 | MDR-TB | lineage4.2.2.1 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR2514173 | Other | lineage4.5 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820766 | Other | lineage4.8 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR2514943 | Other | lineage4.8 | gb | ERR4819980 | Other | lineage4.1.2.1 | None | ERR2516108 | Sensitive | lineage4.1.2.1 | es | ERR2514968 | Other | lineage4.3.3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820107 | RR-TB | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2099790 | MDR-TB | lineage4.1.2.1 | es | ERR266559 | Sensitive | lineage3.1.2 | None | ERR2099779 | Sensitive | lineage4.1.2.1 | es | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4822105 | Other | lineage4.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818665 | Other | lineage4.6.5 | dj | SRR6044896 | Other | lineage4.8 | gb | SAMEA104221066 | MDR-TB | lineage4.1.2.1 | es | SRR6045071 | Other | lineage4.3.1.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR2884653 | RR-TB | lineage4.1.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR2099783 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR2099785 | MDR-TB | lineage4.1.2.1 | es | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR2884668 | Sensitive | lineage4.1.2.1 | es | ERR2884697 | Sensitive | lineage4.1.2.1 | es | ERR2884681 | MDR-TB | lineage4.1.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR2884722 | Sensitive | lineage4.1.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR2099786 | MDR-TB | lineage4.1.2.1 | es | SRR7517799 | MDR-TB | lineage4.1.2.1 | ch | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR067712 | HR-TB | lineage4 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR736837 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9121354 | RR-TB | lineage4.1.2.1 | None | ERR9121458 | Sensitive | lineage4.1.2.1 | None | ERR9121553 | MDR-TB | lineage4.1.2.1 | None | ERR9121655 | Sensitive | lineage4.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787336 | Other | lineage6 | None | SRR1049672 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None |
|---|
