EBG00000313339 - n.745T>C
Drug resistance types
51 Sensitive
30 RR-TB
17 HR-TB
34 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 72 |
| lineage4.8.1 | 4 |
| lineage4.1.2.1 | 31 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 2 |
| lineage4.3.3 | 6 |
| lineage4.3.4.2.1 | 6 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 4 |
| La1.3 | 5 |
| lineage2.2.1 | 14 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.6.1.2 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 4 |
| lineage4.8 | 3 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769439 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR2516108 | Sensitive | lineage4.1.2.1 | es | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2099780 | RR-TB | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR18912069 | Other | lineage4.1.2.1 | None | ERR2099782 | Pre-XDR-TB | lineage4.1.2.1 | es | ERR6358951 | Sensitive | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR2884697 | Sensitive | lineage4.1.2.1 | es | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR2884722 | Sensitive | lineage4.1.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR2099787 | RR-TB | lineage4.1.2.1 | es | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2884668 | Sensitive | lineage4.1.2.1 | es | ERR4769408 | Other | La1.3 | None | ERR2884653 | RR-TB | lineage4.1.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SAMEA104221066 | MDR-TB | lineage4.1.2.1 | es | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR176741 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR9121354 | RR-TB | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR2099791 | MDR-TB | lineage4.1.2.1 | es | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR2099783 | Pre-XDR-TB | lineage4.1.2.1 | es | SRR1181349 | Sensitive | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR2099775 | RR-TB | lineage4.1.2.1 | es | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR2099784 | MDR-TB | lineage4.1.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR2099776 | MDR-TB | lineage4.1.2.1 | es | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR2099777 | MDR-TB | lineage4.1.2.1 | es | ERR323037 | Other | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1180446 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | ERR2099785 | MDR-TB | lineage4.1.2.1 | es | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9121553 | MDR-TB | lineage4.1.2.1 | None | ERR2099778 | RR-TB | lineage4.1.2.1 | es | ERR4816610 | Other | lineage4.3.3 | None | ERR2884681 | MDR-TB | lineage4.1.2.1 | None | ERR867574 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9121458 | Sensitive | lineage4.1.2.1 | None | ERR2884681_ERR2099784 | MDR-TB | lineage4.1.2.1 | None | ERR9121655 | Sensitive | lineage4.1.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4769552 | Sensitive | La1.3 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR2099790 | MDR-TB | lineage4.1.2.1 | es | SRR1062918 | Other | lineage3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR2099779 | Sensitive | lineage4.1.2.1 | es | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR2099781 | Pre-XDR-TB | lineage4.1.2.1 | es | SRR1180420 | Sensitive | lineage4.9 | None | ERR2099789 | MDR-TB | lineage4.1.2.1 | es | SRR6045832 | Other | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR2099788 | MDR-TB | lineage4.1.2.1 | es | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None |
|---|
