EBG00000313339 - n.2099T>C


Drug resistance types
16 Sensitive 26 RR-TB 28 HR-TB 36 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 110 Other
lineage Counts
lineage Count
1
lineage4.9 27
lineage4.1.2.1 12
lineage3.1.2.1 2
lineage4.3.2.1 4
lineage4.8.1 3
lineage4.1.2.1;lineage4.9 1
lineage4.1.2 3
lineage4.3.3 12
lineage4.4.1.1 9
lineage2.2.2 5
lineage3 15
lineage2.2.1 34
La2;lineage2.2 1
lineage4.1.1.3 5
lineage3;lineage4 1
lineage4.3.4.2 1
lineage4.8 19
lineage2.2.1.1 2
lineage4.2.2.2 5
lineage4.1.1.1 6
lineage4.3.4.1 2
lineage4.8.2 1
lineage4.5 2
lineage3.1.1;lineage4.9 1
lineage4.3 1
lineage4.8.2;lineage4.9 1
lineage4.4.1.1.1 3
lineage3;lineage4.9 1
lineage1.1.3.1 2
La1.7;lineage4.9 4
lineage4.1;lineage4.9 1
lineage4.1.3 1
lineage1.2.1.2.1 1
lineage4.6 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.1.1 1
lineage2.1;lineage4.9 1
lineage3.1.1 3
La2;lineage4.9 1
lineage3.1.2.1;lineage4.9 1
lineage4.9;lineage9 1
lineage1.1.2 3
lineage4.2.1 1
lineage4.3.4.1;lineage4.9 2
lineage4 1
lineage4.3.1 1
lineage4.6.5 1
lineage4.6.2.2 3
lineage4.2.2 2
lineage6.1.2 1
lineage4.9;lineage7 1
lineage4.4.1.2 1
lineage1.2.1.1 2
lineage2.2 1
lineage6.3.1 1
lineage6.1.3 1
lineage1.2.2.2 1
lineage4.1.1.3.1 1
lineage1.1.1.1 1
La1.6 1
lineage1.1.3.3 1
spoligotype Counts
spoligotype Count
None 226
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817060 Other None
ERR3283008 Other lineage4.9 None
ERR10796555 Other lineage4.1.2.1 None
SRR1181256 Other lineage4.9 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR10315693 RR-TB lineage4.1.2 None
ERR4814911 Other lineage4.3.3 None
SRR22048536 Other lineage4.3.3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR7070223 HR-TB lineage3 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
ERR4816462 Other lineage4.1.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR10796640 Other lineage4.1.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR10796633 Other lineage4.3.4.2 None
SRR7069835 Other lineage2.2.1 None
ERR4829208 Other lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4819002 HR-TB lineage4.8 None
ERR10796618 Other lineage4.3.4.1 None
SRR5007169 RR-TB lineage4.8.2 None
ERR867574 Other lineage4.9 None
SRR7070535 HR-TB lineage4.1.2.1 None
ERR867567 RR-TB lineage3 None
ERR10796563 Other lineage4.3.3 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR7070293 Other lineage4.8 None
SRR6046020 Other lineage3 None
SRR10315567 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6044841 Other lineage4.9 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR7070329 Other lineage3 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR10796593 Other lineage4.3 None
SRR6046064 Other lineage3 gb
ERR978766 RR-TB lineage4.8 None
ERR2027230 Other lineage4.2.2.2 None
SRR11342685 HR-TB lineage4.4.1.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3283043 Other lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
SRR14179705 Pre-XDR-TB lineage3 None
SRR14801652 HR-TB lineage4.3.3 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR3797086 Sensitive lineage4.9 None
SRR9971113 Other lineage2.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR4820833 Other lineage3;lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR3283051 Other lineage4.9 None
ERR867571 Other lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR10796598 Other lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR10796576 Sensitive lineage4.9 None
ERR10796577 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR19241806 Sensitive lineage4.1.2.1 None
SRR11342695 MDR-TB lineage4.8 None
SRR6046291 Other lineage3 None
SRR9971046 MDR-TB lineage4.8 None
ERR10796635 Other lineage4.8 None
SRR11342646 HR-TB lineage3 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
ERR10796599 Other lineage4.8 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4821325 Other lineage3 None
SRR7069097 Other lineage3.1.2.1 None
ERR6866807 Other lineage4.9 None
ERR4821214 Other lineage1.2.1.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR6044936 Other lineage4.6 None
SRR9971114 Other lineage2.2.1 None
SRR5818572 Sensitive lineage4.2.2.2 None
SRR1181403 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR12708409 HR-TB lineage4.3.3 None
SRR10315556 Sensitive lineage2.2.1 None
ERR4819772 Other lineage1.1.3.1 None
ERR4818180 Other lineage4.8 gb
SRR1180440 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
ERR9119669 HR-TB lineage4.9 None
ERR10796564 Other lineage4.3.3 None
SRR6045071 Other lineage4.3.1.1 None
SRR3675552 Other lineage4.9 None
SRR6046117 Other lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR867526 MDR-TB lineage2.2.1 None
SRR6044983 Other lineage3.1.1 None
SRR18003038 Other lineage2.2.1 None
SRR12708415 HR-TB lineage2.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR11342682 Other lineage4.1.2 None
SRR6045603 Other lineage4.1.1.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR18002976 Other lineage2.2.1 None
SRR11349184 MDR-TB lineage2.2.1 None
ERR10796623 Other lineage4.1.1.1 None
ERR4821704 Other lineage4.3.3 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6045125 Other lineage1.1.2 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR3675509 Other lineage4.9 None
SRR7069030 Other lineage3 None
ERR867541 MDR-TB lineage4.2.1 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
ERR10796580 Other lineage4 None
ERR3276170 Other lineage4.1.2.1 nl
SRR7069319 Other lineage4.5 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6046848 Other lineage4.6.5 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR11342638 MDR-TB lineage4.4.1.1.1 None
SRR7069648 Other lineage4.6.2.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR9971065 RR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR6045944 Other lineage4.1.2.1 None
ERR4820075 Other lineage4.1.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR9787030 RR-TB lineage6.1.2 None
SRR18002908 Other lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR867573 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR6046343 Other lineage2.2.1 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18213736 Other lineage3 None
SRR3675261 Other lineage1.2.1.1 None
SRR6045424 Other lineage1.1.2 None
SRR12708414 HR-TB lineage2.2.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR978765 RR-TB lineage4.8 None
ERR387051 Other lineage4.9 None
SRR11342684 HR-TB lineage4.4.1.1 None
ERR4816610 Other lineage4.3.3 None
ERR4818440 Other lineage6.3.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18003042 Other lineage2.2.1 None
SRR6046852 MDR-TB lineage3 None
ERR10796628 Other lineage4.3.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR7131123 Other lineage4.8 None
SAMEA3501073 RR-TB lineage4.8 None
ERR3806588 Other lineage6.1.3 None
ERR4821119 Other lineage4.4.1.1 None
ERR4819579 HR-TB lineage4.3.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
SRR6045267 RR-TB lineage4.8 None
SRR7131152 MDR-TB lineage2.2.1 None
ERR4769521 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR10315696 Sensitive lineage4.3.2.1 None
SRR7069082 Other lineage4.1.2.1 None
SRR15276982 XDR-TB lineage3 None
SRR6045516 Other lineage3.1.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002945 Other lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
ERR10796595 Other lineage4.9 None
SRR18002985 HR-TB lineage2.2.1 None
ERR10796596 Other lineage4.9 None
SRR5818612 Other lineage4.2.2.2 None
SRR7069137 Other lineage4.8 None
ERR9117788 Other lineage3 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4816270 Other lineage4.1.2.1 None
ERR978767 RR-TB lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR1180446 Other lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
SRR9971144 RR-TB lineage2.2.1 None
ERR10796578 Other lineage2.2.1 None
SRR4033549 Other lineage2.2.2 None
SRR11349153 RR-TB lineage4.1.1.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4818128 Other lineage4.1.2.1 None
ERR4821773 Other La1.6 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR6045312 Other lineage1.1.3.3 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR7585400 MDR-TB lineage3 None
SRR6046766 Other lineage3.1.1 None