EBG00000313339 - n.2099T>C
Drug resistance types
39 Sensitive
66 RR-TB
39 HR-TB
34 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
340 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 1 |
| lineage4.5 | 6 |
| lineage4.6.2.2 | 17 |
| lineage3.1.1 | 12 |
| lineage4.1.2.1 | 57 |
| lineage3 | 61 |
| lineage1 | 2 |
| lineage4.3.4.2 | 6 |
| lineage4.3.3 | 17 |
| lineage4.8 | 41 |
| lineage4.4.1.1 | 19 |
| lineage1.1.3 | 3 |
| lineage6.3.1 | 1 |
| lineage1.1.2 | 15 |
| lineage4.3.2 | 4 |
| lineage4.9 | 42 |
| lineage4;lineage3 | 1 |
| lineage4.8.2 | 5 |
| lineage4.2.2.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.2.1.2.1 | 3 |
| lineage4.3.4.1 | 7 |
| lineage2.2.1 | 40 |
| lineage4.2.2 | 3 |
| lineage4 | 16 |
| lineage4.2.1 | 1 |
| lineage3.1.2.2 | 3 |
| lineage4.3.4.2.1 | 3 |
| lineage3.1.2 | 7 |
| lineage1.1.3.1 | 4 |
| lineage4.1 | 7 |
| 15 | |
| lineage4.8.1 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.6.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.1.1 | 8 |
| lineage1.2.2.2 | 6 |
| lineage4.3.1.1 | 4 |
| lineage4.1.3 | 3 |
| lineage4.3.2.1 | 6 |
| lineage4.7 | 2 |
| lineage1.1.1.1 | 3 |
| lineage5 | 2 |
| lineage4.1.1.3 | 7 |
| lineage2.1 | 1 |
| La1.6 | 2 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2 | 7 |
| lineage3.1 | 2 |
| lineage4.3.1 | 1 |
| lineage1.1.3.3 | 2 |
| lineage4.6.5 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.2 | 5 |
| lineage4.4.2 | 3 |
| lineage2.2 | 2 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.6 | 5 |
| lineage4.3 | 2 |
| lineage4.3.4 | 2 |
| lineage6 | 2 |
| La1.3 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.2 | 4 |
| lineage4.4.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4.1.4 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 531 |
Geographic prevalence
Country level data for this variant is available for 101 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818084 | Other | lineage3.1.1 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818116 | Other | lineage4.3.4.2 | None | ERR4818834 | Other | lineage4.1.2.1 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4818145 | Other | lineage3 | gb | ERR4818190 | Other | lineage4.8 | None | ERR4818180 | Other | lineage4.8 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818556 | Other | lineage3 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4818351 | Other | lineage1.1.3 | None | ERR4818393 | RR-TB | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818440 | Other | lineage6.3.1 | None | ERR2512699 | Sensitive | lineage1.1.2 | gb | ERR4818249 | Other | lineage4.1.2.1 | gb | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818407 | Other | lineage4.3.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817547 | Other | lineage4.2.2.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818964 | Other | lineage1.2.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4817645 | Other | lineage4.8 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR2513652 | Sensitive | lineage4.1.1.3.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819198 | Other | lineage2.2.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4820284 | Other | lineage4.9 | None | ERR4819298 | Other | lineage4.1.2.1 | gb | ERR2513919 | HR-TB | lineage4.6.2.2 | gb | ERR4820318 | Other | lineage4.2.2 | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4820324 | Other | lineage4 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819515 | HR-TB | lineage4.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819423 | Other | lineage4.6.2.2 | None | ERR2514152 | Sensitive | lineage3 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820397 | Other | lineage4.9 | None | ERR4819591 | RR-TB | lineage4.6.2.2 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514550 | MDR-TB | lineage3 | gb | ERR4820787 | Other | lineage3.1.1 | gb | ERR2514552 | Sensitive | lineage3 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR2514692 | Other | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2514668 | Other | lineage4.8.1 | gb | ERR4819787 | Other | lineage4.1.2.1 | None | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR4819830 | Other | lineage2.2.1 | None | ERR2514702 | Other | lineage4.1.2.1 | gb | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514803 | Sensitive | lineage4.6.2 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4820829 | Other | lineage4.8 | None | ERR4820059 | Other | lineage3 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4819955 | Other | lineage3 | None | ERR4819967 | Other | lineage4.3.3 | None | ERR2514981 | HR-TB | lineage2.2.1.2 | gb | ERR2515007 | Other | lineage3 | None | ERR4820026 | Other | lineage3 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2515093 | Other | lineage4.8.2 | gb | ERR4820649 | Other | lineage4.6.1.2 | None | ERR4820107 | RR-TB | None | ERR4820679 | Other | lineage4.8 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4821796 | Other | lineage4.1.1 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821812 | Other | lineage4.8 | gb | ERR4821051 | Other | lineage1.2.1.2.1 | None | SRR6045447 | Other | lineage3 | gb | SRR6045445 | Other | lineage4.3.1.1 | None | SRR6046096 | Other | lineage4.1.2.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821891 | Other | lineage4.8 | None | ERR4821899 | Other | lineage4.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821214 | RR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821953 | Other | lineage4.7 | gb | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4822076 | Other | lineage4.1.2.1 | None | ERR4821332 | Other | lineage4.1.2.1 | gb | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4822033 | Other | lineage3 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821325 | Other | lineage3 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821454 | Sensitive | lineage1.1.2 | gb | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4822105 | Other | lineage4.1 | None | ERR4822171 | Other | lineage3 | gb | ERR4821572 | Other | lineage2.1 | None | ERR4821579 | Other | lineage4.3.4.2 | gb | ERR4822203 | Sensitive | lineage4.4.1.1 | gb | ERR4821610 | Other | lineage4.3.2 | None | ERR4821773 | Other | La1.6 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045743 | Other | lineage3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR5818669 | Sensitive | lineage1.2.2.2 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR6045778 | Other | lineage3.1 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6044841 | Other | lineage4.9 | None | SRR6044884 | Other | lineage3.1.1 | gb | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045986 | Other | lineage3 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046291 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045335 | Other | lineage4.1.2.1 | None | SRR6046064 | Other | lineage3 | gb | SRR6046273 | Other | lineage3.1.2 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046384 | Other | lineage4.3.1.1 | gb | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829835 | HR-TB | lineage4.8 | it | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR6046457 | Other | lineage3 | gb | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046602 | HR-TB | lineage4.1.2.1 | gb | SRR6046729 | Other | None | SRR6046634 | Other | lineage3 | gb | SRR6046641 | Other | lineage4.8 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046905 | Other | lineage3 | gb | SRR6367397 | Other | lineage4.1.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6398013 | Other | lineage4.1.2 | ca | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR9971229 | RR-TB | lineage4.3.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR9971382 | Sensitive | lineage4.4.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1735641 | Sensitive | lineage2.2.1 | gb | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR1063857 | HR-TB | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3797086 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3806588 | Other | lineage6 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4195243 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4769521 | HR-TB | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6197034 | Other | lineage4.9 | None | ERR9117706 | Other | lineage4.4 | None | ERR9117675 | Other | lineage4.8 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117788 | Other | lineage3 | None | ERR9117806 | Other | lineage4.8 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9117813 | Sensitive | lineage1.1.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9119669 | HR-TB | None | ERR9117818 | Sensitive | lineage1.1.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342677 | HR-TB | lineage4.6.2.2 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349153 | RR-TB | lineage4.1.1 | None | SRR11349166 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11349178 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303907 | Other | lineage4.8 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19241806 | Sensitive | lineage4.1.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR19325559 | Sensitive | lineage4.3.2 | None | SRR19304109 | Other | lineage4.8 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4815104 | Other | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815172 | Other | lineage1.2.2.2 | None | ERR4815281 | Other | lineage4.4.2 | None | ERR4815210 | Other | lineage4.3.4.2 | gb | ERR4815268 | Other | lineage4.8 | None | ERR4815193 | MDR-TB | lineage4.8 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815615 | Other | lineage3 | gb | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814312 | Other | lineage4 | None | ERR4814341 | Other | lineage4.7 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815640 | Other | lineage3 | gb | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815312 | Sensitive | lineage3 | gb | ERR4814355 | Other | La1.6 | gb | ERR4815777 | Other | lineage4.9 | None | ERR4815684 | Other | lineage5.1.4 | gb | ERR4814554 | Other | lineage4.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814415 | Other | lineage3.1.1 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4814714 | Other | lineage3 | None | ERR4814709 | Other | lineage4.1.1 | None | SRR3675227 | Other | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4815467 | Other | lineage3 | None | ERR4814951 | Pre-XDR-TB | lineage3.1.2 | gb | ERR4814789 | Other | lineage3 | gb | ERR4814821 | Other | lineage2.2.1 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815077 | Other | lineage2.2.1.1 | gb | ERR4815080 | Other | lineage4.1.2.1 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814986 | Other | lineage4.3.4.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675456 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | ERR4815836 | Other | lineage4.8.2 | None | ERR4815837 | Other | lineage4.1.4 | gb | SRR3675511 | Sensitive | lineage4.6 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4815883 | Sensitive | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | ERR4815905 | Other | lineage1.2.2.2 | gb | ERR2027232 | Other | lineage4.3.4.2 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4817526 | Other | lineage4.4.1.1 | gb | ERR4816988 | Other | lineage3 | gb | ERR4816008 | Other | lineage1.1.3.3 | gb | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816009 | Other | lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816081 | Other | lineage4.8 | gb | SRR3675538 | Other | lineage4.8 | None | ERR4816089 | Other | lineage4.2.2.2 | gb | ERR2027250 | Other | lineage3.1.2 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027230 | Other | lineage4.2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027277 | Other | lineage4.8 | None | ERR4817349 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027284 | HR-TB | lineage4.6.2.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816231 | Other | lineage4 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816373 | Other | lineage4.1.2 | gb | ERR4816270 | Other | lineage4.1.2.1 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | ERR2229148 | Other | lineage4.8 | dk | ERR4816423 | Other | lineage3.1.2 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816437 | Other | lineage3 | gb | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR2513742 | Pre-XDR-TB | lineage4.8 | gb | ERR4816531 | Other | lineage4.1.2 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816649 | Other | lineage3 | None | ERR4816696 | Other | lineage3 | None | ERR4816699 | Other | lineage4.6 | None | ERR4817426 | Other | lineage4.1 | gb | ERR4816756 | RR-TB | None | ERR4817241 | Sensitive | lineage3 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4816804 | Other | lineage4.1 | None | ERR4816883 | Other | lineage4.5 | None | ERR4817274 | Other | lineage4.9 | gb | ERR4816866 | Other | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816912 | Other | lineage4.6.2.2 | gb | ERR4817703 | Other | lineage1.1.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4817306 | Other | lineage3 | gb | ERR4817665 | Other | lineage4.8 | None | ERR4817709 | HR-TB | lineage4.6.2.2 | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4818671 | Other | lineage4.8 | gb | ERR2512986 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4817874 | Other | lineage3 | None | ERR4817834 | Other | lineage1.1.2 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513392 | Other | lineage4.3.2.1 | gb | ERR2513018 | Other | lineage3 | gb | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4817907 | Other | lineage3 | gb | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2513401 | HR-TB | lineage3 | None |
|---|
