lineage | Count |
---|---|
lineage4.9 | 7 |
lineage4.3.3 | 2 |
3 | |
lineage2.2.1 | 6 |
lineage4.8 | 2 |
lineage1.2.2 | 1 |
lineage4 | 2 |
lineage4.1.2.1 | 4 |
lineage4.4.1.1 | 1 |
lineage4.1.1 | 2 |
lineage3 | 1 |
lineage4.1.1.3.1 | 3 |
lineage4.8.2 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1.1 | 1 |
La3 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 | SRR1735596 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR387051 | HR-TB | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4816982 | Other | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2229232 | HR-TB | lineage4.8 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4820284 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820192 | Other | La3 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6044936 | Other | lineage4 | None | SRR6046359 | Other | lineage4.7 | None | ERR2653042 | Other | lineage4.1.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None |
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