EBG00000313325 - n.1024_1025delGTinsCGG
Drug resistance types
46 Sensitive
4 RR-TB
1 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 16 |
| lineage4.3.4.2.1 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage3 | 1 |
| lineage4.4.1.1 | 8 |
| lineage4.1.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8 | 7 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage1.2.2.1 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.9 | 7 |
| lineage2.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.3.4.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR18913779 | Sensitive | lineage3 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR6046152 | Other | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | ERR2515460 | Other | lineage4.8 | za | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | ERR2515484 | Sensitive | lineage4.8 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | ERR867569 | Other | lineage4.9 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None |
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