Rv0668 - c.1236G>C


Drug resistance types
82 Sensitive 40 RR-TB 73 HR-TB 59 MDR-TB 13 Pre-XDR-TB 1 XDR-TB 91 Other
lineage Counts
lineage Count
lineage1.1.2 3
lineage4.1.1.3 6
lineage4.1.2.1 11
lineage4 3
lineage4.9 128
lineage4.3;lineage4.9 1
lineage1.1.3.1 2
lineage4.3.3 7
lineage4.6.1.2 3
lineage4.3.3;lineage4.8 3
lineage5.1.1 2
lineage2.2.2 2
lineage4.4.1.1.1 4
lineage4.7 1
lineage4.8 10
lineage4.2.1 6
lineage4.3.2.1 3
lineage2.2.1 36
lineage4.1.2.1;lineage4.9 1
lineage4.8.1 4
La3;lineage4.9 8
lineage1.2.1.2 1
La1.3 1
La1.7;lineage4.9 1
lineage2.2.1.1 2
La1;lineage4.1.2 1
lineage1.1.1.1 1
lineage4.9.1 1
lineage3;lineage4.9 1
lineage3.1.2.1 1
lineage4.4.1.1 11
lineage4.6.1.1 13
lineage4.4.1.2 2
lineage4.2.2.2 2
lineage4.4 1
lineage1.1.3.2 1
La1.8.1 6
lineage4.3.4.2.1 10
lineage1.2.2.2 1
La1;lineage4.9 3
lineage4.9;lineage7 1
lineage2;lineage4.9 1
lineage2.1 1
lineage3 8
La1.7.X-unk4 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage3.1.1 2
lineage4.1.1.1 2
lineage6.1.3 2
lineage2;lineage4 1
lineage2.2.1;lineage4.9 3
lineage4.8;lineage4.9 2
La3;lineage4 1
2
lineage3.1 1
lineage4.1.1.2 1
lineage3.1.3 1
lineage1.2.1.1 1
lineage2.2;lineage4.9 1
lineage4.5 1
lineage3;lineage4 1
lineage4.6.3 1
lineage4.4.2 1
lineage4.3.3;lineage4.9 1
lineage4.6.2.2 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.4 1
lineage4.1.1.3.1 1
lineage4.1.2.1;lineage4.4.1 1
La1.7;lineage4.9;lineage6 1
lineage4.3.4.2 1
lineage4.1.2 2
lineage2.2.1.2 1
lineage4.3 1
lineage2.2;lineage4 1
lineage4.8.2 1
La1;lineage2;lineage4.9 1
lineage2.2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 359
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341310 Other lineage1.1.2 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR1140736 Other lineage4.1.2.1 None
SRR1181349 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
ERR036207 Other lineage4.3;lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR323066 HR-TB lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR124636 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
ERR751330 MDR-TB lineage5.1.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR7645928 Other lineage4.7 None
SRR19303788 Sensitive lineage4.8 None
SRR5341461 HR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1180996 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR7645899 Other lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR1180250 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR978767 RR-TB lineage4.8 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR736831 Other lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6044875 Other lineage4.9 None
SRR1140586 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR1049735 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR5341467 Other lineage4.9 None
ERR11465189 RR-TB lineage4.9.1 None
SRR1180413 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR1173185 Other lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4798898 MDR-TB lineage3.1.2.1 None
SRR11342655 MDR-TB lineage2.2.1 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
ERR2027233 Sensitive lineage4.1.2.1 None
SAMN02381047 Sensitive lineage4.6.1.1 None
ERR736856 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
SRR1173568 Sensitive lineage4.9 None
SRR1062897 MDR-TB lineage4.4.1.1 None
ERR4819051 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR5865378 Pre-XDR-TB lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR6046878 Other lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR192070 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR181750 Sensitive lineage1.1.3.2 None
SRR6045347 Other lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR12708414 HR-TB lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR2515352 Sensitive lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR5341308 HR-TB lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4816755 Other lineage4.1.1.3 None
ERR3283011 Other La3;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6511621 HR-TB lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR4812763 Other lineage2.2.1 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR1180319 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
SRR19303931 Other lineage2.2.1 None
SRR1184308 RR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341453 Other lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR978766 RR-TB lineage4.8 None
SRR10809074 HR-TB lineage4.9 None
SRR1173281 Other lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR7236330 Other La1.8.1 None
SRR6044876 Sensitive lineage4.9 None
SRR1062902 MDR-TB lineage4.4.1.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9285979 RR-TB lineage3.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR16156775 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR1175512 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR1049736 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR11349133 MDR-TB lineage4.3.3 None
ERR5311094 HR-TB lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR5341425 Other lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR5311087 Other La1.8.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR19303774 Sensitive lineage4.1.2.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
ERR4817069 RR-TB None
SRR28351442 HR-TB lineage3.1 None
ERR245675 Sensitive lineage1.1.2 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180300 Sensitive lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1049629 MDR-TB lineage4.4.1.1 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4769493 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR18002941 RR-TB lineage2.2.1 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR5311084 Other La1.8.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR473279 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR1062937 Sensitive lineage4.6.1.1 None
SRR5341300 HR-TB lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR4815550 Other lineage2.2;lineage4.9 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR323115 Sensitive lineage4.9 None
SRR19303775 Sensitive lineage3 None
ERR9787256 Other lineage6.1.3 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1049743 Sensitive lineage4.6.1.1 None
ERR4811708 HR-TB lineage4 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR1180312 Sensitive lineage4.9 None
ERR3797019 Other La1.8.1 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR1062895 Sensitive lineage4.6.1.1 None
SRR10808805 Other La1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR485006 HR-TB lineage4.9 None
SRR1140677 MDR-TB lineage4.6.1.1 None
ERR3275190 Other lineage3 nl
SRR1173740 Other lineage3;lineage4 None
SRR6046210 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR2446413 Sensitive lineage4.6.3 None
SRR3675235 HR-TB lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR1049744 Sensitive lineage4.6.1.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR10808399 Sensitive lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR8217918 HR-TB lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR19295647 HR-TB lineage4.9 None
ERR4811101 Other lineage4.4.2 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR1180444 Sensitive lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR19303779 Sensitive lineage4.8 None
ERR4797184 HR-TB lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1049723 MDR-TB lineage4.6.1.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1049724 MDR-TB lineage4.6.1.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502470 RR-TB lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR16278274 Other La1.4 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
ERR1023509 MDR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1180410 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR1063896 HR-TB None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR9786597 Other lineage4.6.2.2 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4797474 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR19303773 Other lineage4.6.2.2 None
ERR4797264 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR6045010 Sensitive lineage4.9 None
SRR1140627 Sensitive lineage4.6.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR3797079 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4815556 RR-TB lineage3 None
SRR1049623 MDR-TB lineage4.4.1.1 None
ERR3797048 Other La3;lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SAMN02381005 Sensitive lineage4.6.1.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR18511647 Sensitive lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR1735596 RR-TB lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR1062927 MDR-TB lineage4.6.1.1 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR11342682 Other lineage4.1.2 None
ERR2446509 Other lineage3 nl
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4769508 RR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR5341384 HR-TB lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4872269 XDR-TB lineage2.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR1049630 MDR-TB lineage4.4.1.1 None
ERR4821655 HR-TB lineage4.9 None