Rv0668 - c.1236G>C


Drug resistance types
119 Sensitive 49 RR-TB 53 HR-TB 66 MDR-TB 21 Pre-XDR-TB 1 XDR-TB 98 Other
lineage Counts
lineage Count
lineage4.2.1 7
lineage2.2.1 39
40
lineage4.9 82
lineage4.1.2.1 16
lineage4.4.1.2 2
lineage4.4 1
La1.4 1
lineage4.4.1.1 14
La1.8.1 18
lineage2.2.1.1 2
lineage3 8
lineage4.4.2;lineage4.2.2;lineage2.2.1 1
lineage4.6.2.2 3
lineage4.8 10
lineage1.2.1.2 1
lineage1.1.3.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 2
lineage4.1.1 2
lineage1.2.1.1 1
lineage4.6.1.1 3
lineage4 59
lineage4.3.4.2.1 10
lineage4.6.1 10
lineage2.2 2
lineage4.6.1.2 4
lineage4.5 1
lineage4.6 1
lineage4.1.1.3 3
lineage4.3.4.2 2
lineage4.6.3 1
lineage4.2.2.2 2
lineage3.1.3 1
lineage4.1.1.2 1
lineage1.1.2 3
lineage4.3 1
lineage4;lineage3 1
lineage4.8.2 1
lineage4.1.1.3.1 1
lineage1.1.3.1 2
lineage4.9;lineage2.1 1
lineage4.3.3 7
lineage4.1 1
lineage4.1.2 1
lineage4.7 2
lineage4.4.1.1.1 2
lineage4.8.1 1
lineage4.9.1 1
La1.7.X-unk4 1
La1.3 7
lineage4.9;La1.3 2
lineage3.1.2.1 1
lineage2.2.1.2 1
lineage2.2.2 1
lineage4.4.2 1
lineage5.1.1 3
lineage1.1.1.1 1
lineage3.1.1 2
lineage4.3.2 1
lineage6.1.3 1
lineage4.8;lineage4.3.3 4
lineage4.9;lineage2.2.1 1
lineage4.6.1;lineage3.1.1 1
lineage4.9;lineage2.2 1
lineage2 1
spoligotype Counts
spoligotype Count
None 407
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14802079 MDR-TB lineage4.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14801749 Sensitive None
SRR16156775 Other lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR16627752 RR-TB lineage4.4 None
SRR16156832 RR-TB None
SRR16278274 Other La1.4 None
SRR19303776 Other lineage4.1.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1791747 Other La1.8.1 None
SRR18002950 MDR-TB lineage2.2.1 None
SRR18511647 Sensitive lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR19303775 Other lineage3 None
SRR17567930 Other lineage4.4.1.1 None
SRR18002873 Pre-XDR-TB lineage4.4.2;lineage4.2.2;lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR19303773 Other lineage4.6.2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR19303774 Sensitive lineage4.1.2.1 None
SRR19303788 Sensitive lineage4.8 None
SRR19303931 Other lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR19303779 Sensitive lineage4.8 None
SRR19303806 Sensitive lineage4.1.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR2101471 RR-TB lineage4.4.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR181750 Sensitive lineage1.1.3.2 None
ERR4815310 Other None
SRR3105762 HR-TB None
SAMN02381009 MDR-TB lineage4.4.1.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR4814709 Other lineage4.1.1 None
ERR4812763 Other lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SAMN02381005 Other lineage4.6.1.1 None
SRR3675246 Sensitive lineage4 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4815556 RR-TB lineage3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR1750907 RR-TB None
SRR3675270 HR-TB None
ERR4815550 Other lineage4 None
ERR2027233 RR-TB lineage4.1.2.1 None
SAMN02381037 MDR-TB lineage4.6.1 None
ERR4816944 RR-TB lineage2.2 None
ERR192070 Other None
ERR2229233 Sensitive lineage4 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR4817069 RR-TB None
ERR4816548 MDR-TB lineage4.5 None
ERR4817301 Other lineage4.9 None
ERR2229234 RR-TB lineage4.8 None
SRR5341384 Sensitive lineage4.9 None
ERR4816699 Other lineage4.6 None
ERR4816755 Other lineage4.1.1.3 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR2446413 Sensitive lineage4.6.3 None
ERR4819002 HR-TB lineage4.8 None
ERR4817915 RR-TB lineage4.9 None
ERR2513401 HR-TB lineage3 None
ERR3275190 Other lineage3 nl
ERR2513054 Other lineage4.2.2.2 None
ERR2513121 Sensitive lineage3.1.3 None
SRR5007168 RR-TB lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR3275941 RR-TB lineage4.3 nl
ERR4819051 Other lineage4 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5341453 Sensitive None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5341425 Other lineage4 None
SRR5341396 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR2515352 Sensitive lineage2.2.1 None
SRR5341387 Other lineage4 None
SRR5341455 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
ERR4819842 Other lineage4.1.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341303 RR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
ERR1023509 Other None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR5341308 Sensitive lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341366 Sensitive lineage4 None
ERR4821796 Other lineage4.1.1 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
ERR4821057 HR-TB lineage4 None
ERR4821811 RR-TB lineage4.9 None
SRR6046210 Other lineage4 None
SRR5341469 Other lineage4 None
ERR2446509 Other lineage3 nl
ERR4822261 RR-TB lineage2.2.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR2747656 Other La1.8.1 None
SAMN02381047 Sensitive lineage4.6.1 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821286 Other lineage4.8 None
SRR6045892 Sensitive None
ERR4821704 MDR-TB lineage4.3.3 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
ERR4821655 Sensitive lineage4 None
SRR6044780 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6046250 Other lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045014 Sensitive lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046834 Sensitive lineage4.9 None
SRR6046737 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6046878 HR-TB lineage4 None
SRR6511621 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4872269 XDR-TB lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6896383 RR-TB lineage4.4.1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832644 Other lineage4.3.3 None
SRR6982246 Sensitive lineage4 None
ERR5311084 Other La1.8.1 None
ERR502510 Sensitive lineage4 None
ERR5311087 Other La1.8.1 None
ERR5311092 Other La1.8.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR8217918 HR-TB None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR7535082 Sensitive lineage4 None
SRR7585435 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR323085 Sensitive lineage4 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
SRR7755655 Other lineage4.1.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR036207 Other lineage4.9 None
ERR067699 HR-TB lineage4 None
ERR11465189 RR-TB lineage4.9.1 None
ERR323107 Other lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR108471 HR-TB lineage4 None
ERR10796630 HR-TB None
ERR1063896 Sensitive None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR3283033 Sensitive lineage4.9 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3283031 HR-TB None
ERR3283047 HR-TB None
ERR3283040 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3439265 Other lineage4.9 None
ERR3468578 Other La1.8.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3468609 Other La1.8.1 None
ERR3468615 Other La1.8.1 None
ERR3468638 Other La1.8.1 None
ERR3797074 Sensitive lineage4.9 None
ERR3468644 HR-TB La1.8.1 None
ERR3468671 Other La1.8.1 None
ERR3468693 Sensitive lineage4.9 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797063 HR-TB None
ERR3468655 Other La1.8.1 None
ERR3468670 Other La1.8.1 None
ERR3468702 Other La1.8.1 None
ERR3797048 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR4024991 Other None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797087 Sensitive lineage4 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR405209 Sensitive lineage4 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR4188222 MDR-TB La1.8.1 None
ERR4627320 Other La1.8.1 None
ERR473279 Other lineage4.9 None
ERR4627314 HR-TB La1.8.1 None
ERR4769408 Other La1.3 None
ERR4769495 Other La1.3 None
ERR4769450 HR-TB None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769506 Sensitive La1.3 None
ERR4769555 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769517 Other La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769552 Other La1.3 None
ERR4797184 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4796254 Sensitive lineage4 None
ERR4798898 MDR-TB lineage3.1.2.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4799547 Sensitive lineage2.2.1 None
ERR5865378 Pre-XDR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4811708 HR-TB lineage4 None
ERR4808964 RR-TB lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4811101 Other lineage4.4.2 None
ERR6197036 Other lineage4 None
ERR5908229 Sensitive lineage4.3.3 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6358991 HR-TB None
ERR6358979 Other None
ERR6866022 Other None
ERR6866639 Other None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR751317 Sensitive lineage4.9 None
ERR751330 MDR-TB lineage5.1.1 None
ERR736872 Sensitive lineage4 None
ERR751338 Other lineage5.1.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR751345 Other lineage5.1.1 None
ERR9119101 Sensitive lineage4.3.3 None
ERR8975534 Sensitive lineage4.3.4.2.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR9285979 RR-TB lineage3.1.1 None
ERR9120013 MDR-TB lineage4.3.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR987707 MDR-TB lineage4.7 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786597 Sensitive lineage4.6.2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR9787256 Other lineage6.1.3 None
SRR1013530 HR-TB lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1013531 MDR-TB lineage4.9 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049629 MDR-TB lineage4.4.1.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049723 MDR-TB lineage4.6.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1049724 MDR-TB lineage4.6.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049743 Sensitive lineage4.6.1 None
SRR1049744 Sensitive lineage4.6.1 None
SRR1062869 Pre-XDR-TB lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1062868 HR-TB lineage4.9 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062895 Other lineage4.6.1.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062902 MDR-TB lineage4.4.1.1 None
SRR1062897 MDR-TB lineage4.4.1.1 None
SRR10808399 Sensitive lineage4 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1062928 RR-TB lineage4 None
SRR1062933 Sensitive lineage4.9 None
SRR1062927 MDR-TB lineage4.6.1 None
SRR1062937 HR-TB lineage4.6.1 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140627 Other lineage4.6.1 None
SRR1140677 MDR-TB lineage4.6.1 None
SRR1140736 RR-TB None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140586 HR-TB lineage4.9 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140740 RR-TB lineage4.6.1.2 None
SRR1172717 Other lineage4.9 None
SRR1141261 MDR-TB lineage4.9 None
SRR1158918 Sensitive lineage4 None
SRR1172807 Sensitive lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173185 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173293 MDR-TB lineage4.6.1;lineage3.1.1 None
SRR1173450 RR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1173740 Other None
SRR1175487 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181283 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183965 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None