Rv0668 - c.1236G>C


Drug resistance types
124 Sensitive 38 RR-TB 42 HR-TB 58 MDR-TB 13 Pre-XDR-TB 1 XDR-TB 85 Other
lineage Counts
lineage Count
lineage4.6.1.1 13
lineage2.2.1 36
lineage4.9 129
La1.8.1 6
lineage4.1.1.3 6
lineage4.1.2 2
lineage2.2.1.1 2
lineage1.1.2 3
lineage4.3 1
lineage2.2;lineage4.9 1
lineage4.6.1.2 3
lineage4.8.2 1
lineage1.2.1.1 1
lineage4.3.2.1 3
lineage4 3
lineage4.1.1.1 2
lineage4.4.1.1 11
lineage2.2.2 2
lineage4.1.2.1 11
lineage4.6.3 1
lineage4.8 10
La3;lineage4.9 8
La1;lineage4.9 3
lineage1.1.3.1 2
lineage4.4.1.1.1 4
La1.7.X-unk4 1
lineage4.6.2.2 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.4 1
lineage2.2.1;lineage4.9 3
lineage4.3.4.2.1 10
lineage3.1.3 1
lineage4.8;lineage4.9 2
lineage4.3.3 7
lineage5.1.1 2
lineage3 8
lineage3.1.1 2
lineage4.9;lineage7 1
lineage4.8.1 4
lineage4.1.2.1;lineage4.4.1 1
lineage2.1 1
lineage4.2.1 6
lineage2.2.1.2 1
lineage4.3.3;lineage4.8 3
lineage4.3;lineage4.9 1
lineage2;lineage4.9 1
lineage4.3.4.2 1
lineage1.1.3.2 1
lineage4.5 1
La1.3 1
La1;lineage2;lineage4.9 1
lineage1.2.2.2 1
lineage4.2.2.2 2
lineage4.1.1.3.1 1
lineage3;lineage4 1
La1;lineage4.1.2 1
lineage3.1 1
lineage4.9.1 1
lineage2;lineage4 1
lineage3.1.2.1 1
La1.7;lineage4.9 2
lineage4.4.2 1
lineage4.7 1
2
lineage2.2.1;lineage4 1
lineage2.2;lineage4 1
lineage6.1.3 2
lineage4.4 1
lineage4.1.1.2 1
lineage1.2.1.2 1
lineage4.3.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 2
lineage1.1.1.1 1
lineage4.1.2.1;lineage4.9 1
lineage3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
La3;lineage4 1
spoligotype Counts
spoligotype Count
None 361
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1140723 Sensitive lineage4.6.1.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
ERR5311084 Other La1.8.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SAMN02381037 MDR-TB lineage4.6.1.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR5341310 Other lineage1.1.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR10869071 MDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SAMN02381051 RR-TB lineage4.6.1.2 None
SRR5007169 RR-TB lineage4.8.2 None
ERR4798099 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR736856 Sensitive lineage4.9 None
ERR192070 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4811708 HR-TB lineage4 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR16156817 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR1140751 MDR-TB lineage4.4.1.1 None
ERR4769450 Other lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR4812763 Other lineage2.2.1 None
ERR751326 Other lineage4.9 None
ERR2446413 Sensitive lineage4.6.3 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR19303931 Other lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR7236330 Other La1.8.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR1062902 MDR-TB lineage4.4.1.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR4797193 HR-TB lineage1.1.2 None
SRR21677886 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1049723 MDR-TB lineage4.6.1.1 None
ERR4769452 Other lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR19303773 Other lineage4.6.2.2 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR16278274 Other La1.4 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4024991 Other lineage4.8;lineage4.9 None
SAMN02381012 MDR-TB lineage4.4.1.1 None
ERR2027233 Sensitive lineage4.1.2.1 None
ERR736831 Other lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SAMN02381047 Sensitive lineage4.6.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR751330 MDR-TB lineage5.1.1 None
ERR3797079 Sensitive lineage4.9 None
SRR1173281 Other lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR6046878 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4817915 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7236177 Other La1.8.1 None
ERR3275190 Other lineage3 nl
ERR10762275 MDR-TB lineage4.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
ERR2515352 Sensitive lineage2.2.1 None
SRR3675270 Other lineage4.9 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR18002941 RR-TB lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1180391 Sensitive lineage4.9 None
SRR1049736 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1140677 MDR-TB lineage4.6.1.1 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR17567930 Sensitive lineage4.4.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1172717 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR5341455 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR18511647 Sensitive lineage2.2.1 None
ERR3797048 Other La3;lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR181750 Sensitive lineage1.1.3.2 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR1062927 MDR-TB lineage4.6.1.1 None
SRR11342682 Other lineage4.1.2 None
SRR5341425 Other lineage4.9 None
SRR19303775 Sensitive lineage3 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4769508 RR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR1175487 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR14801749 HR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769495 Other La1.3 None
ERR4797184 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR3273109 HR-TB lineage4 None
SRR11342667 MDR-TB lineage4.3.3 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR978767 RR-TB lineage4.8 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4769493 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR1023509 Other lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR3675246 Other lineage4.9 None
ERR9285979 RR-TB lineage3.1.1 None
SRR5341308 Sensitive lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1175512 Sensitive lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR6046259 Sensitive lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1062895 Sensitive lineage4.6.1.1 None
ERR779852 Sensitive lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR11465189 RR-TB lineage4.9.1 None
SRR1173185 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4798898 MDR-TB lineage3.1.2.1 None
SRR5341469 HR-TB lineage4.9 None
ERR4815556 RR-TB lineage3 None
SRR1183965 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1181368 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1180355 Sensitive lineage4.9 None
ERR4811101 Other lineage4.4.2 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1140586 Sensitive lineage4.9 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1181214 Other lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1158918 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR137286 Other lineage4.9 None
SRR1049629 MDR-TB lineage4.4.1.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1062897 MDR-TB lineage4.4.1.1 None
ERR978765 RR-TB lineage4.8 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1172807 Sensitive lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
ERR1063896 Sensitive None
SRR19303820 RR-TB lineage4.8 None
ERR502511 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR751345 Other lineage5.1.1 None
SRR6046210 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR6358979 Other lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR7645899 Other lineage2.2.1 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR702405 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR473279 Other lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR9029360 MDR-TB lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR2446509 Other lineage3 nl
ERR9787256 Other lineage6.1.3 None
ERR502510 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR4872269 XDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR1049743 Sensitive lineage4.6.1.1 None
ERR4769433 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR4821655 HR-TB lineage4.9 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR3797019 Other La1.8.1 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4816755 Other lineage4.1.1.3 None
ERR4821811 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR124636 Sensitive lineage4.9 None
SRR1049724 MDR-TB lineage4.6.1.1 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1062937 Sensitive lineage4.6.1.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6511621 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR6866639 Other lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR1023236 Other lineage6.1.3 None
SRR1184329 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR5311087 Other La1.8.1 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR4797264 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR19303774 Sensitive lineage4.1.2.1 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR4817069 RR-TB None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR29096178 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR19303788 Sensitive lineage4.8 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR3797087 Sensitive lineage4.9 None
SRR1049735 Sensitive lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR19303779 Sensitive lineage4.8 None
SRR1049744 Sensitive lineage4.6.1.1 None
ERR4769530 RR-TB lineage4.9 None
SRR17567887 Sensitive lineage4.4.1.2 None
ERR4796254 Sensitive lineage4.9 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1140736 Other lineage4.1.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR5865378 Pre-XDR-TB lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SAMN02381005 Sensitive lineage4.6.1.1 None
SRR6044875 Sensitive lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR1140627 Sensitive lineage4.6.1.1 None
SRR1180375 Sensitive lineage4.9 None