Rv0668 - c.1278C>T
Drug resistance types
13 Sensitive
13 RR-TB
4 HR-TB
14 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 4 |
| lineage4.9.1 | 2 |
| lineage4.4.1.1 | 4 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.4.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1 | 5 |
| lineage5.1.1 | 1 |
| lineage4.9 | 12 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.1.2.1 | 4 |
| lineage4.8 | 6 |
| lineage4.3.4.1 | 1 |
| lineage4 | 3 |
| lineage3.1.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.1.2 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage5 | 1 |
| lineage4.1.3 | 2 |
| lineage4.3.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage3;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage4.3.2 | 1 |
| 2 | |
| lineage4.3.4.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.8.1 | 2 |
| lineage3;lineage4 | 1 |
| lineage1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046376 | Other | lineage3 | None | SRR1013530 | Other | lineage4.9.1 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | SRR7236330 | Other | La1.8.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829333 | Other | lineage4 | None | ERR4815909 | Other | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4798262 | HR-TB | La1.2.BCG | None | SRR1062868 | Sensitive | lineage4.3.2.1;lineage4.9 | None | ERR4819491 | Other | lineage4.1.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR10808730 | Other | lineage4.9 | None | ERR4814312 | Other | lineage4 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR12015084 | Other | lineage4.8 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR3675552 | Other | lineage4.9 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1013532 | Sensitive | lineage4.3.2;lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816967 | Other | lineage5 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR1062869 | Sensitive | lineage4.9.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4821334 | Other | lineage4.1.3 | None | SRR24799246 | Sensitive | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR2509886 | Other | lineage3 | None | ERR867573 | Other | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR9786843 | Other | None | ERR4817069 | RR-TB | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR6044952 | Other | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4819655 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4820324 | Other | lineage4 | None | ERR4815777 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4820266 | Sensitive | lineage3 | None | ERR4820817 | Other | lineage4.1.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR192070 | Sensitive | lineage4.9 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None |
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