Rv0668 - c.1278C>T
Drug resistance types
9 Sensitive
51 RR-TB
10 HR-TB
11 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 17 |
| La1.3 | 4 |
| lineage4.9;La1.3 | 1 |
| lineage2.2 | 2 |
| La1 | 1 |
| lineage2.2.1 | 12 |
| lineage5.1.1 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.6.2.2 | 3 |
| 11 | |
| lineage4.9;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 20 |
| lineage4.3.3 | 5 |
| lineage4.8 | 8 |
| lineage1.2.2 | 1 |
| lineage4.4.1.1 | 6 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage3.1.2 | 1 |
| lineage4 | 7 |
| lineage3.1.1 | 4 |
| lineage4.2.1 | 2 |
| lineage4.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 13 |
| lineage5 | 1 |
| La1.8.2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.3.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8.1 | 1 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 164 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4769555 | Other | La1.3 | None | ERR4798262 | HR-TB | La1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1049041 | MDR-TB | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR19428611 | HR-TB | lineage4.3.3 | None | SRR24799246 | Sensitive | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815772 | Other | lineage4.4.1.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814714 | Other | lineage3 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR192070 | Other | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4817069 | RR-TB | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816133 | Other | La1.8.2 | None | ERR4817060 | RR-TB | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816631 | Other | lineage2.2.1 | None | ERR4816756 | RR-TB | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR3275941 | RR-TB | lineage4.3 | nl | ERR4817703 | Other | lineage1.1.1 | None | ERR2512986 | Other | lineage3 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4820324 | Other | lineage4 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514655 | Sensitive | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819730 | Other | lineage4.8 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820833 | HR-TB | None | ERR2514834 | Other | lineage4.7 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2515032 | Other | lineage3 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR2660539 | Other | lineage4.9 | None | SRR5535689 | HR-TB | lineage4.1.2.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821409 | Other | lineage4.8 | None | ERR4821214 | RR-TB | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821712 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045217 | Other | lineage4 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046729 | Other | None | ERR12015084 | Other | lineage4.8 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796598 | RR-TB | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR10796565 | RR-TB | lineage4.9 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3468578 | Other | La1.8.1 | None |
|---|
