lineage | Count |
---|---|
lineage2.2.1 | 9 |
lineage4.8.1 | 2 |
lineage4 | 1 |
lineage4.9 | 3 |
lineage4.3.2 | 1 |
lineage4.8.2 | 1 |
lineage3 | 2 |
lineage5 | 1 |
lineage4.4.1.1 | 4 |
lineage2.2.2 | 2 |
lineage3.1.2.1;lineage4.9 | 1 |
lineage4.8.2;lineage4.9 | 1 |
lineage4.4.1.1.1 | 2 |
lineage3;lineage4.9 | 2 |
lineage4.3.3 | 4 |
lineage4.1.1.3 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.1 | 1 |
lineage4.8 | 6 |
lineage4.6.2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2 | 2 |
lineage3;lineage4 | 1 |
lineage4.1.1.1 | 1 |
lineage3.1.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.1 | 1 |
1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4820324 | Other | lineage4 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR867575 | Other | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816967 | Other | lineage5 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4818522 | Other | lineage3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4817060 | Other | None |
---|