EBG00000313325 - n.606C>T
Drug resistance types
11 Sensitive
8 RR-TB
6 HR-TB
13 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 11 |
| lineage4.8 | 6 |
| La1.2;La1.8.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage2.2.1 | 8 |
| lineage6.1.3 | 2 |
| lineage4.2.2 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.1.3 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.6.1.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage3 | 1 |
| lineage4.3.4.1 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8.1 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867575 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR1023236 | Other | lineage6.1.3 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867567 | RR-TB | lineage3 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR12882288 | HR-TB | lineage1.2.2.2 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR867574 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867571 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR2027250 | Other | lineage3.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None |
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