EBG00000313339 - n.2101A>G
Drug resistance types
48 Sensitive
16 RR-TB
23 HR-TB
30 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;lineage4 | 1 |
| lineage3 | 7 |
| lineage2.2.1 | 38 |
| lineage4.4.2 | 6 |
| lineage4 | 2 |
| lineage4.9 | 65 |
| lineage4.8 | 11 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 5 |
| lineage4.3.3 | 6 |
| lineage4.8.1 | 4 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.2.1 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.3 | 2 |
| lineage4.1.1.3 | 7 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 2 |
| La1.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1 | 8 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.4.1.2 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR18002963 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR7069137 | Other | lineage4.8 | None | ERR5979407 | Other | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR7070351 | Sensitive | lineage3 | None | ERR736831 | Other | lineage4.9 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR10796593 | Other | lineage4.3 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR473323 | HR-TB | lineage4.9 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR10796595 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR10796596 | Other | lineage4.9 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4769495 | Other | La1.3 | None | SRR11342646 | HR-TB | lineage3 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR3283008 | Other | lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR3675265 | Other | lineage4 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | ERR4829208 | Other | lineage4.8 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR751345 | Other | lineage5.1.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1180250 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR10796560 | Other | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR12708392 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR6045928 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6045384 | Other | lineage4.1.2.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR6045909 | Other | lineage4.8.1 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None |
|---|
