EBG00000313339 - n.2101A>G
Drug resistance types
49 Sensitive
29 RR-TB
32 HR-TB
41 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
178 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 6 |
| lineage4.8 | 24 |
| lineage4.1.2.1 | 27 |
| lineage4.9 | 77 |
| lineage3 | 23 |
| lineage1.2.2.2 | 2 |
| lineage4.4.1.1 | 7 |
| 7 | |
| lineage3.1.2.2 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4 | 19 |
| lineage4.3.2 | 3 |
| lineage4.3.3 | 10 |
| lineage2.2.1 | 46 |
| lineage4.3.4.1 | 3 |
| lineage2.2.1.1 | 5 |
| lineage4.6.2.2 | 3 |
| lineage4.3.4.2 | 9 |
| lineage4.1.1 | 5 |
| lineage4.4.2 | 6 |
| lineage4.8.1 | 1 |
| lineage2.2.2 | 3 |
| lineage4.2.1 | 3 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3 | 3 |
| lineage4.4.1.2 | 2 |
| lineage3.1.2.1 | 2 |
| La1.8.1 | 2 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 2 |
| lineage4.6 | 1 |
| lineage5.1.1 | 1 |
| lineage3.1.1 | 4 |
| lineage6 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.5 | 2 |
| La1.2 | 1 |
| lineage4.1.2 | 4 |
| lineage1.1.2 | 3 |
| lineage3.1.3 | 2 |
| lineage1.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.2 | 1 |
| lineage4.7 | 3 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 352 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829289 | Other | lineage4.1.2.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046482 | HR-TB | None | SRR6046517 | Other | lineage4.8 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4800297 | Other | lineage4.1.1.3 | in | ERR323037 | HR-TB | lineage4 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131234 | Other | lineage4.9 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR10796556 | Other | lineage4.3.4.1 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR3468561 | HR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3439441 | Other | La1.8.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR6197030 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197032 | Other | lineage4.9 | None | ERR5979407 | Other | lineage3 | None | ERR6359070 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117794 | Sensitive | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117729 | Other | lineage3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16058726 | Other | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002900 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002972 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18913779 | Other | lineage3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303798 | Sensitive | lineage4.4.1.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | SRR19303815 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304096 | Other | La1.2 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR19325559 | Sensitive | lineage4.3.2 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675475 | Other | lineage4.1.1.3 | None | SRR3675265 | Other | lineage4 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815534 | Other | lineage4 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675282 | Other | None | ERR176751 | HR-TB | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815577 | Other | lineage3.1.3 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR4815883 | Sensitive | lineage4.1.2.1 | None | ERR4817464 | Other | lineage3.1.1 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR4816231 | Other | lineage4 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816227 | RR-TB | lineage3 | None | SRR3675547 | Other | lineage4.9 | None | ERR4817349 | Other | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR212121 | HR-TB | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816649 | Other | lineage3 | None | ERR4817665 | Other | lineage4.8 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4818655 | Other | lineage4.3.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818663 | Other | lineage3 | None | ERR2510794 | Other | lineage4.3.4.2 | None | ERR4817874 | Other | lineage3 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818116 | Other | lineage4.3.4.2 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR2509885 | RR-TB | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4817645 | Other | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819206 | Other | lineage4.8 | None | ERR4819267 | Sensitive | lineage3.1.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514394 | Other | lineage4.3.4.2 | None | ERR4819615 | Other | lineage4.3.4.2.1 | None | ERR4820771 | Other | lineage4.8 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820801 | Other | lineage1.2.2 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820492 | Other | lineage2.2.1 | None | ERR4819793 | Other | lineage4.9 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR2514834 | Other | lineage4.7 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820026 | Other | lineage3 | None | ERR4820829 | Other | lineage4.8 | None | ERR2515007 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820679 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4822033 | Other | lineage3 | None | ERR4821906 | Other | lineage4.1.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822105 | Other | lineage4.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | SRR6045591 | Other | lineage4.1.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6046376 | Other | lineage3 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046250 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb |
|---|
