EBG00000313339 - n.2336C>T


Drug resistance types
30 Sensitive 37 RR-TB 6 HR-TB 40 MDR-TB 19 Pre-XDR-TB 1 XDR-TB 152 Other
lineage Counts
lineage Count
lineage3 9
lineage4.8 53
lineage4.3.3 8
lineage4.9 80
lineage4.1.1.3;lineage4.9 2
lineage2.2.1 50
lineage3.1.3 1
lineage2.2.1;lineage4 2
lineage4.4.2 2
lineage2.2.2 7
lineage4.1.2.1 11
lineage4.1.1.1 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.3 1
lineage4.3.4.2.1 1
lineage4.2.2 1
lineage4.5 2
lineage2.2.1.1 2
lineage1.2.2.2 1
lineage4.2.2.2 3
lineage3.1.1;lineage4.9 1
lineage6.1.3 1
lineage4.7 1
lineage4.2.1 3
La1.7;M.canetti;lineage4.9 1
lineage4.4.1.1 3
lineage4.1.1.3 5
lineage4.1.1.3.1;lineage4.9 1
lineage1.1.1 2
La1.7.X-unk4 1
lineage4.1;lineage4.9 1
lineage4.4.1.1.1 1
lineage4.8.1 2
lineage1.2.1.1 1
lineage2.2.1;lineage4.8 1
lineage4 1
lineage1.1.3.2 1
lineage3.1.2.1;lineage4.9 1
lineage3.1.2 1
lineage3.1.1 1
lineage4.6.5 1
lineage4.3.3;lineage4.9 1
lineage4.1.1.3.1 1
1
lineage4.4.1.2 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.4.2 2
lineage4.3.2.1 1
lineage4.4 1
lineage1.2.1.2 1
La1.8.1 2
spoligotype Counts
spoligotype Count
None 285
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046442 Other lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
SRR7070144 Other lineage4.8 None
ERR10796632 Other lineage4.3.3 None
SAMEA3501065 RR-TB lineage4.8 None
ERR349300 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR978733 RR-TB lineage4.8 None
ERR363449 Other lineage4.9 None
SRR18002964 Other lineage2.2.1 None
SRR7069922 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR6045613 Other lineage3.1.3 None
ERR978694 Other lineage4.8 None
SRR5818422 Other lineage4.9 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR363421 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR18002974 Other lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR11342669 Other lineage4.8 None
ERR10796564 Other lineage4.3.3 None
SRR6046117 Other lineage4.9 None
SRR7131161 Other lineage4.8 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR6152899 MDR-TB lineage2.2.2 ca
SRR18003047 MDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR369161 Sensitive lineage4.9 None
ERR867573 Other lineage4.9 None
SRR6046343 Other lineage2.2.1 None
ERR4769508 RR-TB lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
ERR978735 Other lineage4.8 None
ERR978762 Other lineage4.8 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR349265 Other lineage4.9 None
ERR978748 Other lineage4.8 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR11662694 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR4811030 Other lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR11342688 Other lineage4.2.2.2 None
ERR867572 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
ERR363498 Other lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR6045496 Other lineage6.1.3 None
SRR6046359 Other lineage4.7 None
ERR867541 MDR-TB lineage4.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR11342648 MDR-TB lineage4.1.1.3 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR3675541 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
SRR3675509 Other lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR978752 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18002980 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
ERR978746 RR-TB lineage4.8 None
ERR978750 RR-TB lineage4.8 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR867571 Other lineage4.9 None
ERR363500 Other lineage4.9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR3675260 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR6045621 Other lineage4.1.1.3 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR363479 Other lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR867569 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR19303899 Other lineage3 None
ERR363456 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR373945 Other lineage4.9 None
ERR911929_ERR911930 Other lineage4.8 None
ERR4769530 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR7069347 Other lineage4.1.2.1 None
ERR2600562 MDR-TB lineage2.2.1;lineage4.8 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR978756 Other lineage4.8 None
SRR18002941 RR-TB lineage2.2.1 None
ERR369158 Other lineage4.9 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR9971372 MDR-TB lineage4.1.1.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR3797065 RR-TB lineage4.9 None
ERR978747 Other lineage4.8 None
SRR16156804 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
SAMEA3501015 Other lineage4.8 None
ERR8774355 MDR-TB lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
ERR978757 RR-TB lineage4.8 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR7068885 Other lineage3 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR8975202 Other lineage1.1.3.2 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR5341345 Sensitive lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR18002937 Other lineage2.2.1 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR18002963 Other lineage2.2.1 None
ERR349330 Sensitive lineage4.9 None
SRR5818386 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR7069835 Other lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR560439 Other lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6046177 Other lineage3.1.2 None
SRR3675527 Other lineage4.9 None
SRR18003007 MDR-TB lineage4.5 None
SRR6046020 Other lineage3 None
ERR978693 Other lineage4.8 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR1163055 MDR-TB lineage4.8 None
SRR19303907 Other lineage4.8 None
SRR6046848 Other lineage4.6.5 None
SRR7069946 Other lineage4.8 None
ERR9117759 Other lineage3 None
ERR363490 Other lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR867538 Other lineage4.2.2.2 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR10796597 Other lineage4.3.3 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR11349201 MDR-TB lineage4.1.1.3 None
SRR5818459 Other lineage4.9 None
ERR911929 Other lineage4.8 None
ERR363447 Other lineage4.9 None
ERR978734 RR-TB lineage4.8 None
SRR7131195 Other lineage2.2.1 None
ERR369156 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR373947 Other lineage4.9 None
SRR18003045 Other lineage2.2.1 None
SRR19304115 Other lineage4.1.2.1 None
SAMEA3501070 RR-TB lineage4.8 None
SRR5007165 Other lineage3 None
DRR034348 Other lineage2.2.1 None
SRR6045384 Other lineage4.1.2.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
ERR978754 RR-TB lineage4.8 None
SRR1173833 Other lineage4.9 None
ERR349266 Other lineage4.9 None
SRR18002987 Other lineage2.2.1 None
ERR369159 Other lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR108125 RR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
SRR12708416 Sensitive None
SRR6397733 Other lineage4.4.1.2 None
ERR978755 RR-TB lineage4.8 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
ERR349296 Sensitive lineage4.9 None
ERR10796628 Other lineage4.3.3 None
SRR6045464 Other lineage4.1.1.3 None
ERR363474 Sensitive lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
ERR4819314 HR-TB lineage1.1.1 None
ERR369163 Other lineage4.9 None
SRR6045909 Other lineage4.8.1 None
SRR11342680 Other lineage4.8 None
SRR6045267 RR-TB lineage4.8 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR11342691 MDR-TB lineage2.2.1 None
ERR373946 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR7070293 Other lineage4.8 None
SRR19304104 Other lineage4.8 None
SRR3675548 Sensitive lineage4.9 None
SRR18002956 Other lineage2.2.1 None
ERR978727 Other lineage4.8 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR1175508 Sensitive lineage4.9 None
SRR18002981 Other lineage2.2.1 None
ERR349264 Other lineage4.9 None
SAMEA3450033 Other lineage4.8 None
SRR6044787 Sensitive lineage4.4 None
SRR5341323 Sensitive lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
ERR3014599 Pre-XDR-TB lineage4.1.2.1 tn
SRR5818464 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR6397815 Other lineage4.4.1.1 None
ERR978751 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
SRR6045706 Other lineage4.9 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR4816417 Other lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
ERR10796560 Other lineage4.9 None
ERR2228910 Other lineage4.8 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
SRR7236399 Other La1.8.1 None
ERR867567 RR-TB lineage3 None
SRR1173421 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR6045986 Other lineage3 None
ERR363445 Other lineage4.9 None
ERR2228900 Other lineage4.8 None
SRR7236330 Other La1.8.1 None
SRR6044838 Other lineage4.9 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
ERR10796598 Other lineage4.9 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
ERR560438 Other lineage4.9 None
SRR3675389 Other lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR7068912 Pre-XDR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR978761 Other lineage4.8 None
SRR3675209 Sensitive lineage4.9 None
ERR978760 RR-TB lineage4.8 None