EBG00000313339 - n.618T>G
Drug resistance types
21 Sensitive
41 RR-TB
11 HR-TB
41 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
126 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 35 |
| lineage4.8 | 43 |
| lineage3 | 11 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 60 |
| lineage4.1.1.1 | 5 |
| lineage4.2.1 | 7 |
| lineage1.1.1 | 2 |
| lineage4.8.1 | 4 |
| lineage4.6 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 7 |
| lineage4.1.2 | 2 |
| lineage3.1.2.2 | 2 |
| lineage4.3.3 | 9 |
| lineage4.1.1.3.1 | 2 |
| lineage3.1.2.1 | 3 |
| La1.2.BCG;lineage4.9 | 4 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.7 | 3 |
| lineage4.6.2.2 | 2 |
| lineage2.2.2 | 4 |
| La1.7;lineage4.9 | 2 |
| lineage4.4.1.1 | 5 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.2 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| La1.7.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.8.2 | 1 |
| lineage3;lineage4 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 263 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867573 | Other | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR4820586 | Other | lineage3 | gb | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR7504773 | Sensitive | lineage4.9 | None | SRR6044936 | Other | lineage4.6 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR6045424 | Other | lineage1.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | ERR867575 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR867574 | Other | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4821704 | Other | lineage4.3.3 | None | SRR19304104 | Other | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR2027220 | Sensitive | lineage3.1.3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR19303876 | Other | lineage4.7 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR9117788 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR6044904 | Other | lineage3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978735 | Other | lineage4.8 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7070144 | Other | lineage4.8 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | ERR10796560 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | SRR7645906 | Other | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR3675389 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR7070329 | Other | lineage3 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4.9 | None | SRR7069137 | Other | lineage4.8 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978747 | Other | lineage4.8 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR18003033 | Other | lineage2.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR867544 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR2229436 | Other | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7070320 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR212123 | Other | lineage4.9 | None | ERR2229204 | Other | lineage4.8 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR3675527 | Other | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None |
|---|
