Rv0668 - c.2578T>C


Drug resistance types
89 Sensitive 11 RR-TB 105 HR-TB 30 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 138 Other
lineage Counts
lineage Count
lineage3;lineage4.9 1
lineage4.1.2.1 6
lineage4.8;lineage4.9 2
lineage4.9 208
lineage1.1.1;lineage4 1
lineage1.1.3.1 2
6
lineage4.9;lineage6.3 2
lineage4.1.1.3;lineage4.9 2
La3;lineage4.9 9
La3;lineage2.1;lineage6.3 1
lineage4.1.1.1 3
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1 20
lineage4.3.4 1
lineage2.1 3
lineage3 7
lineage4 6
lineage4.1.2 1
lineage4.1.1.3 3
lineage4.8 5
lineage4.3.4.2.1 3
La1.7;lineage4.9;lineage7 3
La1;lineage4.9 4
La1;lineage2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 3
La1.8.1 1
lineage4.8.1 2
La1.7;lineage4.9 6
lineage4.4.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1;lineage4.9 2
lineage6.1.2 1
lineage4.3.3 4
M.canetti;lineage4.9 2
lineage2.2 2
lineage4.9.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2.1 2
La2;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage1;lineage4.9 2
La1.2.BCG;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2.1 3
lineage4.9;lineage7 1
lineage1.2.1.2 1
La3 2
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2 1
La1;lineage4.1.2 1
lineage5.1.4 1
lineage4.4.1.1.1 2
La1.7;lineage4.9;lineage6 1
lineage4.6.1.1 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9 2
La2;lineage2.2 1
lineage2.2.2 1
lineage2.2.1;lineage4 1
lineage4.3.4.2 1
La1.7.1 1
lineage4.2.2.2 1
lineage1.2.1.1 1
lineage1.1.2 2
lineage4.3.4.1 2
La1.7.1;La1.7.X-unk4 1
lineage4.5 1
lineage4.7 1
La1.7.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.2.1.1 1
lineage4.4.1.2 1
spoligotype Counts
spoligotype Count
None 380
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341396 Other lineage3;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR6046594 Other lineage4.9 None
ERR363479 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1184372 MDR-TB None
SRR12708416 Sensitive None
ERR137286 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR3675441 RR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR20632814 Sensitive lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR5341330 Other lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR9786076 Other lineage3 None
ERR4819624 Sensitive lineage4.1.2.1 None
SRR1159378 Other lineage4.9 None
SRR3675265 Other lineage4 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR6866410 HR-TB lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR11466044 Other lineage4.1.1.3 None
ERR3283031 Other La3;lineage4.9 None
ERR4816151 Other lineage4.8 None
SRR3675455 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961542 Other La1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3275709 HR-TB lineage3 nl
ERR4816762 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR349330 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR926158 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR349264 Other lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR3675585 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR363453 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
ERR4797588 MDR-TB lineage3 None
ERR373947 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR502510 HR-TB lineage4.9 None
ERR363500 Other lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR363446 Other lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR8692887 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR28351339 MDR-TB lineage4 None
SRR28119805 Other lineage4.9 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR369162 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR363449 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR369157 Sensitive lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR3797048 Other La3;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR2512770 Sensitive lineage4.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR369163 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6865502 Sensitive lineage4 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR1173384 Other lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
ERR108471 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1172728 RR-TB La3 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675246 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR473332 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR9970978 Other La1;lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR926161 Sensitive lineage4.9 None
ERR369159 Other lineage4.9 None
ERR736856 HR-TB lineage4.9 None
SRR1175074 Other None
SRR7535086 Other None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR6358979 HR-TB lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR373945 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR6046385 Sensitive lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR363421 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702405 HR-TB lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR18003019 Other lineage2.2.1 None
SRR3675292 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR1792478 HR-TB La1.7.1 None
ERR6866639 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR6046141 Other lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR5341400 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675473 Sensitive lineage4.9 None
ERR176741 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR736848 Other lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR067712 Sensitive lineage4.9 None
SRR3675312 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR181887 Other lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR373946 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR1173118 Other lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR176778 HR-TB lineage4.9 None
ERR4819920 MDR-TB lineage3 None
SRR6789621 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR16156188 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7645928 Other lineage4.7 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675580 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4814639 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR363498 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4796254 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR369160 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR3283040 HR-TB lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR3416776 Other lineage2.1 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1172817 Other La3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None