EBG00000313325 - n.1442_1449delCCTCGGGAinsG
Drug resistance types
1 Sensitive
10 RR-TB
0 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.8 | 7 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR10796633 | Other | lineage4.3.4.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4822150 | Other | lineage4.8 | gb | ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR10796576 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None |
|---|
