EBG00000313339 - n.826C>T
Drug resistance types
21 Sensitive
15 RR-TB
4 HR-TB
13 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage2.2.1 | 16 |
| lineage2.2.2 | 2 |
| lineage3 | 20 |
| lineage4.1.1.3 | 4 |
| lineage4.8 | 11 |
| lineage4.4.1.2 | 1 |
| lineage6 | 1 |
| 3 | |
| lineage3.1 | 2 |
| lineage4.6 | 1 |
| lineage4.9 | 9 |
| lineage1.2.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.4.1.1 | 7 |
| lineage4.3.1.1 | 4 |
| lineage4.2.1 | 2 |
| lineage4.6.2.2 | 4 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4 | 6 |
| lineage3.1.1 | 3 |
| lineage1.1.3.3 | 1 |
| lineage1.1.2 | 3 |
| lineage3.1.2 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR12830365 | Sensitive | lineage4.3.4.2 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18213726 | Other | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR19303985 | Other | lineage4.8 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR21277784 | Sensitive | lineage2.2.1 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304094 | Other | lineage6 | None | SRR22048392 | Other | lineage4.8 | None | SRR3675234 | Other | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675291 | Sensitive | lineage4.6 | gb | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4817380 | Sensitive | lineage3 | None | SRR3675565 | Other | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818505 | Sensitive | lineage3.1.2.1 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4821782 | HR-TB | lineage2.2.1 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR2516165 | Sensitive | lineage4.8 | es | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045447 | Other | lineage3 | gb | SRR6045705 | Other | lineage4.9 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045709 | Other | lineage4.1.2.1;lineage2.2.1 | None | SRR6045743 | Other | lineage3 | None | SRR6044904 | Other | lineage3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044993 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044945 | HR-TB | lineage4.1.2.1 | gb | SRR6044983 | Other | lineage3.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046064 | Other | lineage3 | gb | SRR6045424 | Other | lineage1.1.2 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046291 | Other | lineage3 | None | ERR4829076 | Sensitive | lineage4.1.2.1 | it | SRR6046343 | Other | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046679 | Other | lineage3 | gb | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6046905 | Other | lineage3 | gb | SRR6397642 | RR-TB | None | SRR7131221 | Other | lineage4.6.2.2 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR10796558 | Sensitive | lineage4 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796586 | Other | lineage4.9 | None | ERR9117729 | Other | lineage3 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796635 | Other | lineage4 | None | ERR4195805 | Sensitive | lineage4.8 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR4195245 | Sensitive | lineage4.8 | None | ERR4195792 | Sensitive | lineage4.8 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117806 | Other | lineage4.8 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9121390 | Sensitive | lineage4.8 | None | ERR9121401 | Sensitive | lineage4.8 | None | ERR9121677 | Sensitive | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None |
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