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SRA data
EBG00000313339
- n.2554G>T
Drug resistance types
164 Sensitive
14 RR-TB
27 HR-TB
54 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
165 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
127
lineage4.9
41
lineage4.3.3
21
La1.8.1
17
lineage4.3.2.1
16
lineage3
14
lineage4.4.1.1
14
lineage4.8
12
lineage4.1.2.1
11
lineage4.3.4.2
10
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
446
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR10219868
Other
lineage4.1.2.1
None
ERR10219876
Other
lineage4.3.4.2
None
ERR1063855
Other
lineage4.9
None
ERR137226
MDR-TB
lineage2.2.1
None
ERR144568
Sensitive
None
ERR1465744
Sensitive
lineage4.1.2.1
None
ERR161033
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1665403
MDR-TB
lineage2.2.1
None
ERR2027252
Other
lineage4.2.1.1;lineage4.8
None
ERR2027255
HR-TB
lineage4.4.1.1
None
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