EBG00000313339 - n.3011C>T
Drug resistance types
1 Sensitive
7 RR-TB
1 HR-TB
15 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 5 |
| lineage4.3.3 | 4 |
| lineage4.3.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.8.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.8 | 4 |
| lineage4.6.1.2 | 4 |
| lineage4.2.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 35 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180440 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR25340798 | Sensitive | lineage1.2.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1181256 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1181403 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None |
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