TB-Profiler
Home
Upload
SRA data
Rv1630
- c.138G>C
Drug resistance types
58 Sensitive
14 RR-TB
34 HR-TB
23 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
89
lineage2.2.1
14
La3;lineage4.9
8
lineage3
6
lineage4.6.1.2
5
lineage4.3.3
4
lineage4.8.1
3
lineage4.1.2.1
3
lineage2.2.1;lineage4.9
3
lineage4
3
Showing 1 to 10 of 39 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
174
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067712
Sensitive
lineage4.9
None
ERR1023502
MDR-TB
lineage2;lineage4
None
ERR1023509
Other
lineage4.9
None
ERR1034634
HR-TB
lineage4.9
None
ERR1063846
HR-TB
lineage4.9
None
ERR1063855
Other
lineage4.9
None
ERR108125
RR-TB
lineage4.9
None
ERR13266684
Pre-XDR-TB
lineage2.2.1
None
ERR212138
HR-TB
lineage4.9
None
ERR2513229
MDR-TB
lineage2.2.1
None
Showing 1 to 10 of 174 entries
Previous
1
2
3
4
5
…
18
Next