Rv1630 - c.138G>C
Drug resistance types
47 Sensitive
42 RR-TB
44 HR-TB
27 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 26 |
| lineage3 | 15 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9 | 103 |
| lineage4.3.4.2 | 2 |
| lineage3.1.1 | 1 |
| 23 | |
| lineage4.8 | 4 |
| lineage1.1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1 | 16 |
| lineage4.2.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.2.1 | 1 |
| lineage4.8.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.6.1.2 | 5 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage3.1 | 1 |
| La1.8.2 | 1 |
| lineage4.5 | 1 |
| lineage4;lineage2 | 1 |
| lineage6 | 1 |
| lineage1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 243 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819307 | RR-TB | lineage4 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819224 | Other | lineage1.2.1.2.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820397 | Other | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR1023509 | Other | None | ERR4819933 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR7496471 | Sensitive | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR8217918 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR8692807 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815471 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4816470 | Other | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816756 | RR-TB | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818393 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None |
|---|
