lineage | Count |
---|---|
lineage4.4.1.1 | 5 |
lineage4.6.2.2 | 1 |
lineage2.2.2 | 1 |
lineage4.9 | 4 |
lineage4.8 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.8.1 | 1 |
lineage4 | 3 |
lineage4.2.2.2 | 1 |
lineage3;lineage4 | 2 |
lineage4.3.3 | 4 |
lineage2.2.1 | 3 |
lineage4.1.2.1 | 4 |
lineage3;lineage4.9 | 2 |
lineage4.4.2 | 1 |
lineage4.1.1.3 | 1 |
lineage3.1.2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1.2.2 | 1 |
lineage1.1.3.1 | 2 |
lineage4.1.2 | 2 |
lineage4.1.1.1 | 1 |
lineage3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.2.2 | 1 |
lineage4.3.4.2 | 2 |
lineage4.2.1 | 1 |
lineage4.4.1.1.1 | 1 |
lineage3.1.1 | 2 |
lineage4.3.2 | 1 |
lineage4.1 | 1 |
lineage4.1.3 | 2 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.3.1 | 1 |
spoligotype | Count |
---|---|
None | 61 |
ID | Drug resistance | Lineage | Country iso2 | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4819655 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4821007 | Other | lineage1.2.2.2 | None | ERR4814312 | Other | lineage4 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4829333 | Other | lineage4 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR4815777 | Other | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR4829039 | RR-TB | lineage4.3.1 | None |
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