lineage | Count |
---|---|
lineage4 | 5 |
lineage1.2.2 | 1 |
lineage4.4.2 | 1 |
lineage4.1 | 2 |
lineage3.1.2 | 1 |
lineage4.9 | 10 |
lineage4.2.1 | 2 |
lineage3 | 18 |
lineage4.8 | 7 |
lineage2.2.1 | 5 |
lineage3.1.1 | 3 |
lineage4.1.2.1 | 13 |
lineage2.2.1.1 | 1 |
La1.8.2 | 1 |
lineage5 | 1 |
lineage4.3.3 | 4 |
lineage4.1.2 | 3 |
lineage3.1 | 1 |
5 | |
lineage4.1.1.3 | 2 |
lineage1.1.1 | 1 |
lineage3.1.2.1 | 1 |
lineage6 | 1 |
lineage4.5 | 1 |
lineage1 | 1 |
lineage4.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.1.1.3.1 | 3 |
lineage4.2.1.1 | 1 |
lineage1.1.3.1 | 3 |
lineage4.4.1.1 | 6 |
lineage1.2.2.2 | 2 |
lineage4.3.4.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage4.7 | 1 |
lineage4.1.3 | 1 |
lineage3.1.2.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.3.1 | 1 |
spoligotype | Count |
---|---|
None | 119 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814312 | Other | lineage4 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814714 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815334 | Other | lineage3.1.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816756 | RR-TB | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2512986 | Other | lineage3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819655 | Other | lineage4.8 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514834 | Other | lineage4.7 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR2514854 | Other | lineage4.3.3 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820184 | MDR-TB | lineage3 | gb | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | SRR6045957 | Other | lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | SRR6045664 | Other | lineage4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045384 | Other | lineage4.1.2 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR10796565 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046729 | Other | None | SRR6046815 | Other | lineage3 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None |
---|