EBG00000313339 - n.2338G>C
Drug resistance types
11 Sensitive
20 RR-TB
3 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 3 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.3.3 | 6 |
| lineage6 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.9 | 19 |
| lineage4.6 | 2 |
| lineage3.1.1 | 5 |
| lineage3 | 17 |
| lineage4.4.1.1 | 6 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 11 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 7 |
| lineage3.1.2 | 2 |
| lineage4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.3 | 1 |
| La1.8.2 | 1 |
| lineage3.1 | 2 |
| lineage1.1.1 | 2 |
| lineage1 | 2 |
| lineage4.8 | 3 |
| lineage3.1.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 4 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.1.4 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| 1 | |
| lineage4.2.2.2 | 1 |
| lineage4.3.1 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 130 |
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR3806588 | Other | lineage6 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR1181161 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4814714 | Other | lineage3 | None | ERR4814671 | Other | lineage3 | gb | ERR4815502 | Other | lineage4.1 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR4814896 | Other | lineage2.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR2512986 | Other | lineage3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4818988 | Other | lineage1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR4818261 | Other | lineage1.1.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818538 | Other | lineage3 | gb | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4817619 | Other | lineage4.1.2.1 | gb | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4820652 | Other | lineage1.1.1 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820161 | Other | lineage3 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4821958 | Other | lineage4.3.3 | gb | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045910 | Other | lineage3.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044896 | Other | lineage4.8 | gb | SRR6044904 | Other | lineage3 | None | SRR6046020 | Other | lineage3 | None | SRR6044936 | Other | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046359 | Other | lineage4.7 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None |
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