EBG00000313339 - n.2885T>C


Drug resistance types
21 Sensitive 31 RR-TB 5 HR-TB 20 MDR-TB 7 Pre-XDR-TB 3 XDR-TB 94 Other
lineage Counts
lineage Count
lineage4.3.3 4
lineage2.2.2 5
lineage4.9 14
lineage2.2.1 24
lineage4.2.2 1
lineage3 21
lineage4.1.1.3 2
lineage6 1
lineage4.1.1 6
lineage4.4.2 2
lineage4.1.2.1 13
lineage4 7
lineage4.2.1 2
lineage1.2.1.1 2
lineage1.2.2.2 1
lineage2.2.1.1 3
lineage4.4.1.1 9
lineage3.1 3
lineage4.6.1.2 1
4
lineage4.7 3
lineage1 2
lineage4.1.2 3
lineage1.1.3.1 4
lineage1.1.1 2
lineage4.6.2.2 2
lineage3.1.2.1 1
lineage3.1.3 1
lineage4.2.2.2 3
lineage4.3.2 2
lineage4.1.1.3.1 4
lineage4.8 6
lineage4.3.4.2 1
La3 1
lineage4.3.1.1 3
lineage4.3.4.1 2
lineage3.1.1 3
lineage4.8.2 1
lineage4.2.1.1 1
lineage4.3.1 1
lineage3.1.2.2 2
lineage1.1.2 2
lineage4.6.5 1
lineage4.3.2.1 1
lineage4.9;lineage4.3.4 1
lineage4.3 1
La1.8.1 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14801652 MDR-TB lineage4.3.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR1735596 RR-TB lineage4.9 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18213736 MDR-TB lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR8025570 XDR-TB lineage2.2.2 None
SRR18913750 Other lineage2.2.1 None
SRR19304094 Other lineage6 None
SRR2101388 Sensitive lineage4.1.1 None
SRR3675474 Other lineage4.1.1 None
ERR9806941 XDR-TB lineage2.2.2 None
ERR4815301 Other lineage4.4.2 None
ERR2446370 Sensitive lineage4.1.2.1 nl
ERR4814312 Other lineage4 None
ERR4815394 RR-TB lineage4.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4814763 Other lineage2.2.1 None
SRR3675261 Other lineage1.2.1.1 None
ERR4815517 Other lineage1.2.2.2 None
ERR4814896 Other lineage2.2.1.1 None
ERR4817526 Other lineage4.4.1.1 gb
ERR4814681 Other lineage2.2.1 None
SRR3675230 RR-TB lineage3 None
ERR4815467 Other lineage3 None
ERR4815534 Other lineage4 None
ERR4815994 Other lineage3 gb
ERR2027257 Other lineage4.1.2.1 None
SRR3675552 RR-TB lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
ERR2512986 Other lineage3 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR3275558 Sensitive lineage4.1.2.1 nl
ERR4817131 Pre-XDR-TB None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817189 Other lineage4.7 None
ERR4818988 Other lineage1 None
SRR3675565 Other lineage3 None
ERR4816531 Other lineage4.1.2 None
ERR4817435 Other lineage1.1.3.1 None
ERR4816907 Other lineage1.1.1 None
ERR2510590 Pre-XDR-TB lineage3.1 pk
ERR4818726 Other lineage4.1.2.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4817964 RR-TB lineage4.1.2.1 gb
ERR4818050 Other lineage4.6.2.2 None
ERR4818126 RR-TB lineage1 None
ERR4819011 Other lineage3.1.2.1 None
ERR2513589 Other lineage3.1.3 None
ERR4818065 Other lineage4.1.2.1 None
ERR2512606 MDR-TB lineage3 None
ERR4818869 Other lineage4.2.2.2 None
SRR5007168 RR-TB lineage4.9 None
ERR3148155 Sensitive lineage4.3.2 None
ERR3276170 Other lineage4.1.2.1 nl
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR2509886 RR-TB lineage3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007178 Pre-XDR-TB lineage4.1.1.3.1 None
SRR5007170 RR-TB lineage4.9 None
ERR2512849 RR-TB lineage1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
ERR2512850 Sensitive lineage4.9 gb
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2446445 Sensitive lineage2.2.1 nl
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4819096 Other lineage4.4.1.1 None
SRR5152936 MDR-TB lineage2.2.1 None
ERR4817619 Other lineage4.1.2.1 gb
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR2513830 RR-TB lineage4.8 None
ERR4819307 RR-TB lineage4 None
ERR4819368 Sensitive lineage4.8 gb
ERR4820324 Other lineage4 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820397 Other lineage4.9 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR2514834 Other lineage4.7 None
ERR4819948 Other lineage4.4.1.1 None
ERR3275465 Sensitive lineage2.2.1 nl
ERR4820184 MDR-TB lineage3 gb
ERR2514943 Other lineage4.8 gb
ERR4820690 Other lineage4.1.1 gb
ERR4820192 Other La3 None
SRR6045485 Other lineage4.9 None
ERR4821796 Other lineage4.1.1 None
SRR6045422 Other lineage4.3.1.1 None
ERR4821176 Pre-XDR-TB lineage2.2.1 None
SRR6046096 Other lineage4.1.2.1 None
ERR4821119 Other lineage4.4.1.1 None
ERR4821214 RR-TB None
ERR4822021 Other lineage4.8 gb
ERR4821286 Other lineage4.8 None
ERR4821341 Other lineage4.3.4.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821417 Other lineage1.1.3.1 None
ERR4821492 HR-TB lineage3 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045778 Other lineage3.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR5818622 Sensitive lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818653 Sensitive dj
SRR6045876 Other lineage3 gb
SRR6044983 Other lineage3.1.1 None
SRR6044784 MDR-TB lineage3 None
SRR6045928 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6046159 Other lineage4.8.2 None
SRR6045052 HR-TB lineage4.2.1.1 None
SRR6045056 Other lineage2.2.1 gb
SRR6045164 Other lineage4.1.2.1 None
SRR6045384 Other lineage4.1.2 None
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
SRR6046291 Other lineage3 None
ERR4829039 RR-TB lineage4.3.1 None
ERR2851359 Other lineage4.9 None
ERR323035 Sensitive lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046729 Other None
SRR6046815 Other lineage3 None
ERR4831565 XDR-TB lineage2.2.2 None
SRR6832359 Sensitive lineage2.2.1 None
SRR6046508 Sensitive lineage3.1.2.2 gb
SRR6046534 Other lineage1.1.2 None
SRR6046848 Other lineage4.6.5 None
SRR6046852 MDR-TB lineage3 None
SRR6896247 Sensitive lineage4.1.1 None
SRR10315462 RR-TB lineage4.3.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR7516395 MDR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR10796552 Sensitive lineage4.3.4.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796564 Other lineage4.3.3 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796582 HR-TB lineage4.3 None
ERR10796590 Other lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117740 Other lineage3.1.1 None
ERR9117823 Other lineage1.1.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
ERR5162071 Other La1.8.1 None
ERR10796558 Sensitive lineage4 None
ERR10796563 Other lineage4.3.3 None
ERR10796574 Other lineage4.9 None
ERR10796575 RR-TB lineage4.9 None
ERR10796583 Other lineage2.2.1 None
ERR10796593 RR-TB lineage4 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR10315693 RR-TB lineage4.1.2 None
SRR11349155 MDR-TB lineage4.4.1.1.1 None