EBG00000313339 - n.2642C>G
Drug resistance types
3 Sensitive
14 RR-TB
4 HR-TB
23 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 26 |
| lineage4.2.2.2 | 3 |
| lineage2.2.1 | 34 |
| lineage4.1.2.1 | 3 |
| lineage4.8 | 5 |
| lineage3 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.1.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2.1 | 3 |
| lineage4 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage2.2.2 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 3 |
| lineage1.2.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.4.2 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818432 | MDR-TB | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR13180301 | HR-TB | lineage3 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | ERR10796577 | Other | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR5818460 | Other | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR5818386 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR5818425 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796591 | Other | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR5818385 | Other | lineage4.9 | None | ERR867555 | Other | lineage3 | None | SRR7069946 | Other | lineage4.8 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR3675509 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR5818388 | Other | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | SRR5818414 | Other | lineage4.9 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR18002995 | Other | lineage4.4.2 | None |
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