lineage | Count |
---|---|
lineage2.2.1 | 9 |
lineage4.9 | 23 |
La3;lineage4.9 | 4 |
lineage3 | 4 |
lineage4.3.3 | 2 |
lineage2.2.2 | 2 |
lineage3.1.2.1 | 1 |
lineage2.2;lineage4 | 1 |
lineage4 | 1 |
lineage1.1.1 | 1 |
lineage4.8.1 | 1 |
lineage4.8 | 2 |
lineage4.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage3;lineage4 | 1 |
lineage4.1.2.1 | 2 |
La3;lineage4 | 1 |
lineage4.4.1.1 | 1 |
lineage4.4.2 | 1 |
lineage1.2.1.2 | 1 |
lineage4.4.1.1.1 | 2 |
La1.8.1 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4815994 | Sensitive | lineage3 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1173281 | Other | lineage3 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None |
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