EBG00000313325 - n.604C>T


Drug resistance types
43 Sensitive 22 RR-TB 4 HR-TB 12 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 47 Other
lineage Counts
lineage Count
lineage3 10
lineage4 3
lineage4.9 59
lineage2.2.1 16
lineage1.1.2 2
lineage4.3.1 1
lineage4.3.1.1 1
lineage4.4.1.1 2
lineage6 1
lineage4.4.2 1
lineage4.2.2 1
La1.8.1 1
lineage4.3.4.1 1
lineage4.8.1 1
lineage4.6 1
lineage4.4.1.1.1 2
lineage4.1.2.1 2
lineage4.8 10
lineage4.9;lineage2.2 1
lineage2.2 1
4
lineage4.5 1
lineage2.2.1.1 2
lineage2 1
lineage2.2.2 1
lineage4.1.1.3 1
lineage3.1.2 1
lineage4.1.1 1
lineage1.2.1.1 1
lineage4.3.2.1 1
lineage4.1.1.3.1 2
lineage1.2.1.2.1 1
lineage4.3.4.2 1
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 136
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
ERR2851359 Other lineage4.9 None
ERR2843508 Sensitive lineage2.2.1 None
SRR6046534 Other lineage1.1.2 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6046852 MDR-TB lineage3 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046860 Other lineage4.4.1.1 None
ERR3806588 Other lineage6 None
ERR2886463 Sensitive lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
DRR034348 Other lineage2.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR3439441 Other La1.8.1 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1172717 Other lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR9117704 Other lineage4.6 None
ERR9117788 Other lineage3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1175506 Sensitive lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1180977 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR5818419 Sensitive None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR22424743 Pre-XDR-TB lineage1.1.2 None
SRR22424778 RR-TB lineage2.2.1.1 None
SAMEA3501065 RR-TB lineage4.8 None
SRR3675265 Other lineage4 None
SRR1181325 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR18213726 Other lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19325518 MDR-TB lineage2.2.1 None
ERR4814661 Sensitive lineage3 None
ERR4815471 Other lineage4.9 None
SRR3675230 RR-TB lineage3 None
SAMEA3501015 Other lineage4.8 None
ERR4816964 Other lineage4.9 None
ERR2027250 Other lineage3.1.2 None
ERR4818259 RR-TB lineage4.1.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR5818426 Other None
SRR4033447 HR-TB lineage4.3.2.1 None
SAMEA3450033 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4819357 Other lineage4.9 None
ERR4818507 RR-TB lineage4.1.2.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5818458 Other None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4817555 RR-TB lineage3 None
SAMEA3501067 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819528 RR-TB lineage3 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SAMEA3501070 RR-TB lineage4.8 None
SRR5818445 Other None
ERR4819933 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR6046117 RR-TB lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR6045642 Other lineage3.1.2.2 None
SRR6046141 Other lineage4.9 None
SRR5818399 Sensitive lineage4.9 None
SRR5818402 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818410 Sensitive lineage4.9 None
SRR5818413 HR-TB lineage4.9 None
SRR5818430 Sensitive lineage4.9 None
SRR5818404 Other lineage4.9 None
SRR5818428 Sensitive lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818421 Sensitive lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6045957 Other lineage4.9 None