EBG00000313325 - n.604C>T
Drug resistance types
35 Sensitive
19 RR-TB
2 HR-TB
13 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 39 |
| lineage4.8 | 33 |
| lineage3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 9 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.8.1 | 2 |
| lineage4.2.2 | 1 |
| La1.8.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage2.2.2 | 2 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180355 | Sensitive | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR911929 | Other | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR978756 | Other | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | SRR6045832 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | DRR188816 | Other | lineage4.2.2 | None | ERR978735 | Other | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR7236374 | Other | La1.8.1 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867571 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR867575 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978751 | Other | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1175512 | Sensitive | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR867569 | Other | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR5818388 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR978762 | Other | lineage4.8 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR867572 | Other | lineage4.9 | None |
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