lineage | Count |
---|---|
lineage4.2.1 | 2 |
lineage3.1.1 | 1 |
lineage4.1.1.3 | 2 |
lineage3;lineage4.9 | 1 |
lineage2.2.1 | 8 |
lineage2.2.2 | 2 |
La1.2 | 1 |
lineage4.1.2.1 | 4 |
lineage3 | 2 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2 | 1 |
lineage3.1.2.1;lineage4.9 | 1 |
La1.8.1 | 1 |
lineage4.9 | 6 |
lineage4.4.1.1.1 | 1 |
lineage3.1.2.1 | 2 |
lineage4.1.3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.1 | 2 |
lineage1.2.2 | 1 |
lineage4.3.3 | 1 |
lineage1.2.1.2 | 1 |
lineage4.4.1.2 | 1 |
lineage4.8.1 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.2 | 2 |
lineage3;lineage4 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 50 |
ID | Drug resistance | Lineage | Country iso2 | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4769418 | Other | La1.2 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR867567 | RR-TB | lineage3 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR867573 | Other | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None |
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