lineage | Count |
---|---|
lineage4.8.1 | 1 |
lineage4.3.2 | 1 |
lineage3 | 3 |
lineage3;lineage4 | 2 |
lineage1.1.3.1 | 1 |
lineage4.8 | 3 |
lineage2.2.1 | 7 |
lineage4.9 | 4 |
lineage4.2.1 | 2 |
lineage4.4.1.1.1 | 2 |
lineage3.1.1 | 1 |
lineage4 | 1 |
lineage4.4.1.1 | 2 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2.2 | 1 |
lineage3;lineage4.9 | 1 |
lineage1.2.2.2 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.2.1 | 2 |
lineage3.1.2.1 | 1 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.3.3 | 3 |
lineage4.1.1.3 | 2 |
lineage4.1.1.1 | 2 |
lineage4.6.2.2 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 50 |
ID | Drug resistance | Lineage | Country iso2 | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4819307 | Other | lineage4.3.2 | None | SRR7070223 | HR-TB | lineage3 | None | SRR6046815 | Other | lineage3 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4820324 | Other | lineage4 | None | SRR5007165 | Other | lineage3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4815225 | Other | lineage1.2.2.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815909 | Other | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819305 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1735598 | RR-TB | lineage4.9 | None |
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