Rv0668 - c.396T>G


Drug resistance types
86 Sensitive 15 RR-TB 68 HR-TB 28 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 80 Other
lineage Counts
lineage Count
lineage4.8 3
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9 140
La3;lineage4 1
lineage2.2.2 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1 18
lineage4.9.1 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.5 2
La3;lineage4.9 8
La2;lineage4.9 1
M.canetti;lineage4.9 4
lineage1.1.2 3
lineage4.9;lineage7 4
lineage4.3.4.2.1 3
lineage6.1.3 1
lineage4.4 1
lineage4.1.1.2 1
lineage3 5
La3;lineage4.3.4 1
La1.7;lineage4.9 6
La1;lineage2;lineage4.9 1
4
lineage4.6.2.2 4
La1;lineage4.9 2
lineage1.1.3.1 1
lineage6.1.1 2
lineage2.2 4
La1.7;lineage3;lineage4.9;lineage7 1
lineage2;lineage4 1
La1.2.BCG 1
lineage4.6.3;lineage4.9 1
lineage4.4.1.1 1
lineage4.1.2.1 3
lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1 2
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage6 1
lineage4.3.3 1
La1.7.1 1
lineage4.1.2 1
lineage4.9;lineage9 3
La1.7;M.canetti;lineage4.9 3
lineage4.5 1
M.canetti;lineage1 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage3;lineage4 1
lineage4.8;lineage4.9 2
lineage2.2.1.1 1
lineage4 3
lineage4.9;lineage6.3 1
La1.8.1 2
lineage4.6.1.1 1
lineage4.3.4.2 1
lineage2.1;lineage4.9 2
lineage2.2;lineage4 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
lineage4.6.1.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.1;lineage4.5 1
lineage4.3.2.1 1
lineage4.1.1.3 1
La2;lineage4.9;lineage9 1
lineage4.4.1.1.1 2
lineage1.1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 283
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2514327 HR-TB lineage4.8 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR387051 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR245758 Other lineage4.9.1 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341455 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR6358979 Other lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR3797048 Other La3;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR9786444 Sensitive lineage4.8 None
ERR9787256 Other lineage6.1.3 None
ERR2446566 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR3797015 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR212123 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR124636 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR161037 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR26399265 Other lineage2.2.1 None
ERR926159 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
SRR7535086 Other None
ERR4799378 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675246 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR5341467 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6044835 Other lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR3283006 RR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4800527 MDR-TB lineage2.2.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR4817069 RR-TB None
SRR10808730 Other lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4829606 Sensitive lineage4.1.2.1 None
SRR1173281 Other lineage3 None
ERR926165 Sensitive lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR181744 HR-TB La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR1063896 Sensitive None
ERR3797080 Sensitive lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR10315466 RR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR5341366 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR15014655 Other M.canetti;lineage1 None
SRR10808399 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR29096150 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1173740 Other lineage3;lineage4 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR987722 MDR-TB None
SRR5341387 Other lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR3797087 Sensitive lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR7236177 Other La1.8.1 None
SRR29096410 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786597 Other lineage4.6.2.2 None
ERR3283040 HR-TB lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR3797029 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR4815079 RR-TB lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR502511 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR5341400 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR13264981 Sensitive La1.7;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR29097058 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR29050859 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4797184 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR3273109 HR-TB lineage4 None
SRR29231425 Sensitive lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR4797193 HR-TB lineage1.1.2 None
ERR1034634 HR-TB lineage4.9 None
SRR9971113 Other lineage2.2.1 None
SRR29097026 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
SRR20970016 Other lineage2.2 None
SRR1180996 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR19295647 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR2693252 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR1181403 Other lineage4.9 None