lineage | Count |
---|---|
lineage4.9 | 4 |
La2 | 1 |
La1.4 | 1 |
lineage4.4.1.1 | 2 |
lineage2.2.1.1 | 1 |
lineage4 | 1 |
1 | |
lineage4.8 | 2 |
lineage4.5 | 1 |
lineage4.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.2.2.2 | 1 |
lineage2.2.1 | 6 |
lineage4.3.2.1 | 1 |
lineage2.2.2 | 1 |
lineage3 | 1 |
lineage4.9;La1.3 | 1 |
La1.3 | 1 |
La1.6 | 1 |
spoligotype | Count |
---|---|
None | 30 |
ID | Drug resistance | Lineage | Country iso2 | SRR16156775 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR8025632 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9806974 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815310 | Other | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4820586 | Other | lineage3 | gb | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR10315567 | Other | lineage2.2.1 | None |
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