EBG00000313325 - n.406G>C
Drug resistance types
21 Sensitive
36 RR-TB
12 HR-TB
19 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| lineage4.6.1.1 | 4 |
| lineage4.3.3 | 7 |
| lineage4.1.2.1 | 12 |
| lineage3 | 11 |
| lineage4.6.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4 | 7 |
| lineage4.8 | 36 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1 | 11 |
| lineage2.2.2 | 2 |
| lineage4.9 | 38 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4 | 1 |
| 4 | |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 2 |
| La1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| La1.6 | 1 |
| lineage1.1.2 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 177 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815816 | Other | lineage4.5 | gb | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | DRR034348 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796573 | Other | lineage4.8 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796579 | Sensitive | lineage4.8 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796584 | Other | lineage4.9 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796621 | Other | lineage4.8 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796622 | Other | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796630 | HR-TB | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4822032 | Other | lineage2.2.1 | gb | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR3468577 | HR-TB | La1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR4407552 | Sensitive | lineage4.1.2.1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11342690 | Sensitive | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1172300 | Sensitive | lineage1.1.2 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1183143 | Sensitive | lineage1.1.2 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4815669 | HR-TB | lineage1.2.2.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816746 | Sensitive | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4817214 | Other | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228890 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4817301 | Other | lineage4.9 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2228910 | Other | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820464 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819863 | RR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4820829 | Other | lineage4.8 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820185 | Sensitive | lineage4.9 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821054 | Other | lineage3 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SRR5535696 | MDR-TB | lineage4.3.3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821409 | Other | lineage4.8 | None | ERR4828642 | HR-TB | lineage2.2.1 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6044769 | Other | lineage1.1.2 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6896534 | Sensitive | None | SRR6797425 | Sensitive | lineage1.1.3.1 | None |
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