EBG00000313325 - n.406G>C
Drug resistance types
38 Sensitive
37 RR-TB
5 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
148 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 5 |
| lineage4.9 | 109 |
| lineage4.6.1.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4.3.3 | 5 |
| lineage4.8 | 55 |
| lineage3 | 10 |
| lineage2.2.1 | 7 |
| lineage4.3.4.2.1 | 5 |
| lineage1.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| La1.6 | 1 |
| lineage4.6.5 | 2 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage6.2.3 | 1 |
| lineage4.8;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9.1 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 239 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1182878 | Other | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | SRR1208925 | Other | lineage4.9 | None | SRR1180094 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1183531 | Other | lineage4.9 | None | SRR1181422 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | ERR911929 | Other | lineage4.8 | None | SRR1183686 | Sensitive | lineage4.9 | None | SRR1180569 | Sensitive | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | SRR1180087 | Other | lineage4.9 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR1209038 | Sensitive | lineage4.9 | None | SRR1013527 | Other | lineage2.2.1 | None | SRR1202378 | Other | lineage4.9 | None | SRR1208611 | Other | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1208476 | Other | lineage4.9 | None | SRR1181269 | Other | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | ERR3283008 | Other | lineage4.9 | None | SRR1172300 | Sensitive | lineage1.1.2 | None | SRR1208539 | Sensitive | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4821409 | Other | lineage4.8 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR978761 | Other | lineage4.8 | None | SRR1183281 | Other | lineage4.9 | None | SRR1062868 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR1208827 | Sensitive | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR1181358 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1208891 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR978756 | Other | lineage4.8 | None | SRR1181490 | Other | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR10796599 | Other | lineage4.8 | None | ERR4828879 | HR-TB | lineage3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | DRR184629 | Other | lineage2.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR1209022 | Other | lineage4.9 | None | SRR7535074 | Sensitive | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR10796579 | Sensitive | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR1183684 | Other | lineage4.9 | None | SRR1208196 | Sensitive | lineage4.9 | None | SRR1202706 | Other | lineage4.9 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR1202714 | Sensitive | lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR10796624 | Other | lineage4.8 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR1182880 | Other | lineage4.9 | None | SRR1202406 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SRR1183213 | Other | lineage4.9 | None | SRR1183067 | Other | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | SRR1182900 | Sensitive | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR1208682 | Other | lineage4.9 | None | SRR1208756 | Other | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1182990 | Other | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR1180578 | Other | lineage4.9 | None | SRR1183548 | Other | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | SRR1181569 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1208222 | Sensitive | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR1208648 | Sensitive | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1208281 | Sensitive | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR10796573 | Other | lineage4.8 | None | SRR1208486 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1208536 | Other | lineage4.9 | None | SRR1202404 | Other | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1181580 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1180831 | Other | lineage4.9 | None | SRR1183520 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1208588 | Other | lineage4.9 | None | SRR1180020 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1180486 | Other | lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR978694 | Other | lineage4.8 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1183143 | Sensitive | lineage1.1.2 | None | SRR1202397 | Sensitive | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR1208277 | Other | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR1208721 | Other | lineage4.9 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | ERR2229733 | Other | lineage4.8 | dk | SRR7535082 | Other | lineage4.9 | None | SRR1202656 | Sensitive | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR1208562 | Other | lineage4.9 | None | SRR1202384 | Other | lineage4.9 | None | SRR7535054 | Sensitive | lineage4.6.1.1 | None | ERR10796621 | Other | lineage4.8 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7236134 | Other | La1.8.1 | None | ERR978762 | Other | lineage4.8 | None | SRR1013532 | Sensitive | lineage4.3.2;lineage4.9 | None | SRR1180113 | Other | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1062869 | Sensitive | lineage4.9.1 | None | SRR1180686 | Other | lineage4.9 | None | SRR1180482 | Other | lineage4.9 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR1208553 | Other | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR1183402 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR978693 | Other | lineage4.8 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR10796596 | Other | lineage4.9 | None | SRR1141261 | Sensitive | lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1180623 | Sensitive | lineage4.9 | None | SRR1183224 | Other | lineage4.9 | None | SRR1181299 | Other | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | SRR1013530 | Other | lineage4.9.1 | None | SRR7535080 | Sensitive | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4822032 | Other | lineage2.2.1 | gb | SRR1183341 | Other | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | SRR7535077 | Sensitive | lineage4.6.1.2 | None | SRR1209015 | Sensitive | lineage4.9 | None | SRR1183091 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR1202708 | Other | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR1180503 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR1183170 | Other | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | SRR1182927 | Other | lineage4.9 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR1180624 | Other | lineage4.9 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR1181589 | Other | lineage4.9 | None | ERR10796622 | Other | lineage4.8 | None | SRR1183438 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1202728 | Other | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1209004 | Sensitive | lineage4.9 | None | SRR7535053 | Sensitive | lineage3 | None | SRR1182954 | Other | lineage4.9 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | ERR10796634 | Other | lineage4.7 | None | ERR2228838 | Other | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None |
|---|
