EBG00000313325 - n.1278A>G
Drug resistance types
45 Sensitive
24 RR-TB
5 HR-TB
14 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 5 |
| lineage4.3.4.2.1 | 3 |
| lineage4.8 | 45 |
| lineage1.1.2 | 42 |
| lineage6.1.1 | 2 |
| lineage2.2.1 | 7 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.9 | 11 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage1.1.2;lineage1.2.2.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2;lineage4.1 | 1 |
| La1.8.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| La1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR22251234 | Sensitive | lineage1.1.2 | None | ERR9787099 | Sensitive | lineage6.1.1 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR28044511 | MDR-TB | lineage1.1.2 | None | SRR28044510 | MDR-TB | lineage1.1.2 | None | SRR28046030 | Sensitive | lineage1.1.2 | None | SRR28045514 | Sensitive | lineage1.1.2 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR18213770 | Sensitive | lineage1.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22249586 | Sensitive | lineage1.1.2 | None | SRR6797651 | HR-TB | lineage1.1.2 | None | ERR978747 | Other | lineage4.8 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR7902720 | Sensitive | lineage1.1.2 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | ERR11049701 | Sensitive | lineage1.1.2 | None | ERR978762 | Other | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR978748 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR25340857 | Sensitive | lineage1.1.2 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR978693 | Other | lineage4.8 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | ERR2509680 | Sensitive | lineage1.1.2 | gb | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4817515 | Sensitive | lineage1.1.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR7902599 | Sensitive | lineage1.1.2 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | ERR7902642 | Sensitive | lineage1.1.2 | None | SRR11348179 | Sensitive | lineage1.1.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR28044509 | MDR-TB | lineage1.1.2 | None | SRR28045599 | Sensitive | lineage1.1.2 | None | ERR3799543 | Sensitive | lineage6.1.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4769493 | Other | lineage4.9 | None | ERR978756 | Other | lineage4.8 | None | SRR15014712 | MDR-TB | lineage1.1.2;lineage1.2.2.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR7069391 | Other | lineage4.9 | None | SRR11348203 | Sensitive | lineage1.1.2 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR4820503 | Sensitive | lineage2.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR1238559 | Other | lineage4.9 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR2200143 | Sensitive | lineage1.1.2 | de | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4819531 | Sensitive | lineage1.1.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR22251430 | Sensitive | lineage1.1.2 | None | ERR978727 | Other | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR228169 | Sensitive | lineage1.1.2 | None | ERR4799452 | HR-TB | lineage1.1.2 | in | ERR4831356 | Sensitive | lineage1.1.2 | de | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | SRR1735717 | Sensitive | lineage1.1.2 | gb | ERR911929 | Other | lineage4.8 | None | SRR2100526 | Sensitive | lineage1.1.2 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR10465753 | Sensitive | lineage1.1.2 | None | SRR15014749 | MDR-TB | lineage1.1.2 | None | ERR4831150 | Other | lineage1.1.2 | de | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | DRR034348 | Other | lineage2.2.1 | None | ERR400410 | Sensitive | lineage1.1.2 | None | ERR978761 | Other | lineage4.8 | None | SRR11348202 | Sensitive | lineage1.1.2 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR28045968 | Sensitive | lineage1.1.2 | None | SRR28045879 | HR-TB | lineage1.1.2 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR400313 | Sensitive | lineage1.1.2 | gb | SRR22424873 | Sensitive | lineage1.1.2 | None | ERR4816216 | Sensitive | lineage1.1.2;lineage4.1 | gb | SRR7236134 | Other | La1.8.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR4818560 | Sensitive | lineage1.1.2 | gb | ERR911930 | Other | lineage4.8 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4797101 | Sensitive | lineage1.1.2;lineage1.2.2.2 | in | SRR6982139 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR22424791 | Pre-XDR-TB | lineage1.1.2 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR2200142 | Sensitive | lineage1.1.2 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR2100433 | Sensitive | lineage1.1.2 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119683 | Other | lineage4.2.1 | None | SRR10808730 | Other | lineage4.9 | None | SRR1735716 | Sensitive | lineage1.1.2 | gb | ERR4819853 | Sensitive | lineage1.1.2 | gb |
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