EBG00000313325 - n.1278A>G
Drug resistance types
37 Sensitive
18 RR-TB
11 HR-TB
10 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 19 |
| lineage1.1.2 | 32 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4 | 5 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage3 | 11 |
| lineage4.1;lineage1.1.2 | 1 |
| lineage4.9 | 10 |
| lineage4.4.1.1 | 4 |
| lineage4.1.1.3 | 3 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.3.3 | 4 |
| lineage2.2.1 | 10 |
| lineage4.6.2.2 | 2 |
| 3 | |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage1.2.2.2;lineage1.1.2 | 2 |
| lineage4.7 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR6797651 | HR-TB | lineage1.1.2 | None | SRR6797452 | Sensitive | lineage1.1.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR1950072 | RR-TB | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4816231 | Other | lineage4 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4816103 | Sensitive | lineage3 | gb | ERR2200143 | Sensitive | lineage1.1.2 | de | ERR4816216 | Other | lineage4.1;lineage1.1.2 | gb | SRR4033203 | Sensitive | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816445 | Sensitive | lineage1.1.2 | gb | ERR2229234 | RR-TB | lineage4.8 | None | ERR4817515 | Sensitive | lineage1.1.2 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR2229233 | Sensitive | lineage4 | None | ERR2229801 | Other | lineage4 | None | ERR4817434 | Other | lineage3 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR228169 | Sensitive | lineage1.1.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4818831 | Other | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2509680 | Sensitive | lineage1.1.2 | gb | ERR4818560 | Other | lineage1.1.2 | gb | SRR6280286 | Sensitive | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819531 | Sensitive | lineage1.1.2 | None | ERR11049701 | Sensitive | lineage1.1.2 | None | ERR1035138 | MDR-TB | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514679 | HR-TB | lineage2.2.1 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4819853 | Sensitive | lineage1.1.2 | gb | SRR5341330 | HR-TB | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820130 | Other | lineage3 | None | ERR4820193 | Other | lineage3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4822114 | Other | lineage4.1.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6044837 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4828879 | MDR-TB | lineage3 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046442 | Other | lineage3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4831150 | Other | lineage1.1.2 | de | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | ERR4831356 | Sensitive | lineage1.1.2 | de | DRR034348 | Other | lineage2.2.1 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR3275190 | Other | lineage3 | nl | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR017781 | Other | lineage3 | None | ERR10465753 | Sensitive | lineage1.1.2 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR400313 | Sensitive | lineage1.1.2 | gb | ERR3799543 | Sensitive | lineage6.1.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR400410 | Sensitive | lineage1.1.2 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797101 | Sensitive | lineage1.2.2.2;lineage1.1.2 | in | ERR4799452 | HR-TB | lineage1.1.2 | in | ERR6197022 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197033 | Other | lineage4.7 | None | ERR7902599 | Sensitive | lineage1.1.2 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR7902642 | Sensitive | lineage1.1.2 | None | ERR7902720 | Sensitive | lineage1.1.2 | None | SRR1062851 | MDR-TB | lineage4.8 | None | ERR9787099 | Sensitive | lineage6.1.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR9119683 | Other | lineage4.2.1 | None | SRR11348203 | Sensitive | lineage1.1.2 | None | SRR11348179 | Sensitive | lineage1.1.2 | None | SRR11348202 | Sensitive | lineage1.1.2 | None | SRR18213770 | Sensitive | lineage1.1.2 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR124453 | HR-TB | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15014712 | MDR-TB | lineage1.2.2.2;lineage1.1.2 | None | SRR1735717 | Sensitive | lineage1.1.2 | gb | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR11972206 | HR-TB | lineage1.1.3.1 | None | SRR15014749 | MDR-TB | lineage1.1.2 | None | SRR16278274 | Other | La1.4 | None | SRR1735716 | Sensitive | lineage1.1.2 | gb | SRR21240055 | Other | lineage4.1.2.1 | None | SRR2100526 | Sensitive | lineage1.1.2 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2100433 | Sensitive | lineage1.1.2 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR22424791 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR22424873 | Sensitive | lineage1.1.2 | None | SRR21658550 | Other | lineage1.1.1 | None |
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