SRR19221476
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813004
|
HR-TB
|
lineage4.3.3
|
None
|
ERR12118056
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR20958121
|
Sensitive
|
lineage4.3.3
|
None
|
ERR163995
|
Sensitive
|
lineage4.3.3
|
mw
|
ERR1768624
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR7910860
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260438
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958087
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23402842
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260224
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR14801399
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28239623
|
HR-TB
|
lineage4.3.3
|
None
|
ERR13276320
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR28393676
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4818844
|
HR-TB
|
lineage4.3.3
|
gb
|
ERR4830766
|
MDR-TB
|
lineage4.3.3
|
ir
|
SRR28394183
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260210
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR7517834
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR2677416
|
XDR-TB
|
lineage4.3.3
|
de
|
SRR6152914
|
HR-TB
|
lineage4.3.3
|
ca
|
ERR2679298
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958103
|
Sensitive
|
lineage4.3.3
|
None
|
SRR22461695
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR5153594
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20969774
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13261922
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1213892
|
Other
|
lineage4.3.3
|
pe
|
SRR29055895
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958083
|
Sensitive
|
lineage4.3.3
|
None
|
SRR7131154
|
HR-TB
|
lineage4.3.3
|
None
|
SRR28394300
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751591
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4813716
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4024528
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16370478
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6785155
|
HR-TB
|
lineage2.2.1;lineage4.3
|
None
|
ERR6865602
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260193
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260211
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6480336
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13261885
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6356942
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6832139
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23861989
|
Sensitive
|
lineage4.3.3
|
None
|
SRR10130139
|
Sensitive
|
lineage4.3.3
|
None
|
SRR24799298
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2513177
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR3639780
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR3257985
|
Sensitive
|
lineage4.3.3
|
fr
|
SRR28514706
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11775717
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958118
|
Sensitive
|
lineage4.3.3
|
None
|
SAMEA2534420
|
MDR-TB
|
lineage4.3.3
|
uz
|
SRR29081653
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261892
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4816569
|
Sensitive
|
lineage4.3.3
|
gb
|
SRR16370378
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1193673
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3287685
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR22048557
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958147
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958130
|
Sensitive
|
lineage4.3.3;lineage4.9
|
None
|
SRR20958081
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4817018
|
Sensitive
|
lineage4.3.3
|
None
|
ERR216944
|
Sensitive
|
lineage4.3.3
|
mw
|
SAMEA2534551
|
MDR-TB
|
lineage4.3.3
|
uz
|
ERR4812995
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811913
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29748787
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29126491
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR19241766
|
Sensitive
|
lineage4.3.3
|
None
|
ERR9029849
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516527
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2516668
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR4829814
|
Sensitive
|
lineage4.3.3
|
it
|
ERR3287747
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR10129718
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4178154
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6832134
|
HR-TB
|
lineage4.3.3
|
None
|
SRR22528521
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13261618
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958113
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13284121
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR751416
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR072106
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260219
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287363
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
SRR25827730
|
MDR-TB
|
lineage2.2.1.1;lineage4.3.3
|
None
|
ERR10561952
|
Sensitive
|
lineage4.3.3
|
None
|
SRR23340074
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2510194
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812805
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4811979
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4815601
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR551197
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4817071
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR2707056
|
MDR-TB
|
lineage4.3.3
|
cd
|
ERR552112_ERR552111
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR552260_ERR552259
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10129717
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3287786
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1193870
|
HR-TB
|
lineage4.3.3
|
sl
|
SRR19241805
|
Sensitive
|
lineage4.3.3
|
None
|
SRR16087876
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813321
|
Sensitive
|
lineage4.3.3;lineage4.3.4.2
|
None
|
SRR21675933
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813731
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461610
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812877
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034703
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287803
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865444
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29231719
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR25395703
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10465971
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751351
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR1062920
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR6480537
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260230
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260693
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR21736940
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958133
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3273129
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR17657953
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812632
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866164
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10561885
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29440906
|
HR-TB
|
lineage4.3.3
|
None
|
ERR11043615
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR1034748
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813025
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958140
|
Sensitive
|
lineage4.3.3
|
None
|
ERR7911012
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21576608
|
RR-TB
|
lineage4.3.3
|
None
|
ERR4820803
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR9029855
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21658576
|
Sensitive
|
lineage4.3.3
|
None
|
SRR15508557
|
Other
|
lineage4.3.3
|
None
|
SRR20958089
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3257986
|
Sensitive
|
lineage4.3.3
|
fr
|
ERR4831140
|
Sensitive
|
lineage4.3.3
|
de
|
SRR20958136
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813686
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3257983
|
Sensitive
|
lineage4.3.3
|
fr
|
ERR3287749
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR23402845
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260188
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21690613
|
Sensitive
|
lineage4.3.3
|
None
|
SRR13232756
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR10680153
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21239814
|
Sensitive
|
lineage4.3.3
|
None
|
SRR22196590
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29056204
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260617
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958073
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393412
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR22461585
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4815921
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR12117909
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18715097
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR19241780
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21690406
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958144
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26112745
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13267701
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260639
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4822599
|
XDR-TB
|
lineage4.3.3
|
de
|
ERR2184353
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR16088044
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394216
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1193871
|
Sensitive
|
lineage4.3.3
|
sl
|
SRR23402841
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4812964
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4812993
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958109
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958146
|
Sensitive
|
lineage4.3.3
|
None
|
SRR10808525
|
Other
|
lineage4.3.3
|
None
|
SRR12931800
|
Sensitive
|
lineage4.3.3
|
None
|
ERR552297
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4829788
|
MDR-TB
|
lineage4.3.3
|
it
|
SRR28859589
|
Sensitive
|
lineage4.3.3
|
None
|
SRR6832533
|
HR-TB
|
lineage4.3.3
|
None
|
ERR6866332
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958123
|
Sensitive
|
lineage4.3.3;lineage4.9
|
None
|
ERR405193
|
Sensitive
|
lineage4.3.3
|
None
|
SRR10808671
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866954
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3257987
|
Sensitive
|
lineage4.3.3
|
fr
|
ERR9634321
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813031
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR3287725
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6879047
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287766
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR552298
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR12416821
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7910880
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28859718
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3287872
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260227
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR552111
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812749
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR10808753
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11068260
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260212
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812847
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808782
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2600446
|
Sensitive
|
lineage4.3.3
|
None
|
SRR13870403
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR12268359
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751436
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR10680132
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751543
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR14801303
|
HR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
SRR6831812
|
RR-TB
|
lineage4.3.3
|
None
|
ERR4818948
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR9907699
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4820234
|
MDR-TB
|
lineage4.3.3
|
gb
|
SRR28393364
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR23862147
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28860051
|
Other
|
lineage4.3.3
|
None
|
ERR3148037
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1166325
|
MDR-TB
|
lineage4.3.3
|
ro
|
ERR11044304
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11081306
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813082
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR046894
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR13260696
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21690194
|
Sensitive
|
lineage4.3.3
|
None
|
ERR551399_ERR551398
|
Sensitive
|
lineage4.3.3
|
None
|
SRR19241785
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3273138
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958095
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10680224
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6831998
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29094400
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260697
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393473
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28706696
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29053591
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13285639
|
Sensitive
|
lineage4.3.3
|
None
|
SRR10809148
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2510232
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13290892
|
Sensitive
|
lineage2.1;lineage4.3
|
None
|
SRR29052752
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10561925
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11081809
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR1034677
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR553024
|
HR-TB
|
lineage4.3.3
|
None
|
SRR23310821
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3287470
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287524
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287564
|
HR-TB
|
lineage4.3.3
|
None
|
SRR25395630
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10465876
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751595
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR9285893
|
Sensitive
|
lineage4.3.3
|
None
|
ERR9786254
|
Sensitive
|
lineage4.8
|
None
|
ERR12117983
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11068091
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10680097
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2446161
|
Sensitive
|
lineage4.3.3
|
nl
|
ERR13260128
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261600
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261648
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812776
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287374
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR11081913
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958122
|
Sensitive
|
lineage4.3.3
|
None
|
SRR7517680
|
Sensitive
|
lineage4.3.3
|
pe
|
SRR19241796
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11050697
|
Sensitive
|
lineage4.3.3
|
None
|
ERR6879033
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813364
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR21663270
|
Sensitive
|
lineage4.3.3
|
None
|
SRR10147698
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3273165
|
RR-TB
|
lineage4.3.3
|
None
|
ERR4025035
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29539559
|
MDR-TB
|
lineage4.1.2;lineage4.3.3
|
None
|
SRR29440696
|
Sensitive
|
lineage4.3.3
|
None
|
SRR26112564
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28394259
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28858396
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4813536
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6865695
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4812401
|
Other
|
lineage4.3.3
|
pe
|
ERR13285472
|
Sensitive
|
lineage4.3.3
|
None
|
ERR9029854
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR775388
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6865739
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21732226
|
Sensitive
|
lineage4.3.3
|
None
|
ERR067612
|
RR-TB
|
lineage4.3.3
|
ru
|
ERR7911009
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958075
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2707133
|
MDR-TB
|
lineage4.3.3
|
cd
|
ERR2184485
|
Other
|
lineage4.3.3
|
pe
|
SRR20958128
|
Sensitive
|
lineage4.3.3;lineage4.9
|
None
|
ERR4812950
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260682
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR552112
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813526
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813642
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1193901
|
MDR-TB
|
lineage4.3.3
|
tm
|
ERR552259
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2517629
|
Sensitive
|
lineage4.3.3
|
nl
|
SRR28393563
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4822324
|
XDR-TB
|
lineage4.3.3
|
de
|
SRR21690419
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11067889
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11068060
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13261904
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3275965
|
Sensitive
|
lineage4.3.3
|
nl
|
ERR2510757
|
HR-TB
|
lineage4.3.3
|
it
|
SRR19325562
|
Sensitive
|
lineage4.3.3
|
None
|
SRR22536486
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6480343
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11080939
|
Other
|
lineage4.3.3
|
None
|
ERR1034750
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13260229
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28859959
|
Sensitive
|
lineage4.3.3
|
None
|
ERR7911366
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR22196585
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393556
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393460
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393767
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393365
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28706540
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808785
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28394089
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393904
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393469
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394092
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13230059
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13284802
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2517630
|
Sensitive
|
lineage4.3.3
|
nl
|
ERR11082066
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260135
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3276045
|
Sensitive
|
lineage4.3.3
|
nl
|
SRR11033652
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958150
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260168
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287854
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR21691032
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4025040
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958098
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11067477
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751437
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR12117970
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4813053
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13275993
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7911376
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR19325552
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13261675
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10808332
|
Sensitive
|
lineage4.3.3
|
None
|
ERR046887
|
Sensitive
|
lineage4.3.3
|
gb
|
ERR4813019
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR11243475
|
Sensitive
|
lineage4.3.3
|
None
|
SRR19241784
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29052972
|
Sensitive
|
lineage4.3.3
|
None
|
DRR473839
|
Other
|
lineage4.3.3
|
None
|
ERR13260195
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10129719
|
Sensitive
|
lineage4.3.3
|
None
|
SRR10130137
|
Sensitive
|
lineage4.3.3
|
None
|
SRR14802103
|
Other
|
lineage4.3.3
|
None
|
ERR13284622
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261590
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4819680
|
Sensitive
|
lineage4.3.3
|
None
|
SRR5817471
|
MDR-TB
|
lineage4.3.3
|
au
|
SRR6480610
|
Sensitive
|
lineage4.3.3
|
None
|
ERR2516902
|
MDR-TB
|
lineage4.3.3
|
gb
|
ERR11043080
|
Sensitive
|
lineage4.3.3
|
None
|
SRR14519696
|
Sensitive
|
lineage4.3.3
|
None
|
SAMEA2533409
|
MDR-TB
|
lineage4.3.3
|
uz
|
ERR552297_ERR552298
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR551398
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1034679
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR3257984
|
Sensitive
|
lineage4.3.3
|
fr
|
ERR6879035
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
None
|
ERR4813623
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11043427
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13291781
|
Sensitive
|
lineage4.3.3
|
None
|
ERR6866131
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10561954
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR7361929
|
Sensitive
|
lineage4.3.3
|
None
|
SRR3724976
|
Sensitive
|
lineage4.3.3
|
pe
|
ERR10680075
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1193869
|
Sensitive
|
lineage4.3.3
|
sl
|
ERR2510238
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4818268
|
Sensitive
|
lineage4.3.3
|
None
|
SRR11033607
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29538886
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR23339994
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21690300
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21728329
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260702
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1034684
|
MDR-TB
|
lineage4.3.3
|
co
|
SRR19241777
|
Sensitive
|
lineage4.3.3
|
None
|
ERR550707
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR16058049
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13290921
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR550706
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR20958086
|
Sensitive
|
lineage4.3.3
|
None
|
ERR9634278
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4178184
|
Sensitive
|
lineage4.3.3
|
None
|
SRR14801333
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4195704
|
Sensitive
|
lineage4.3.3
|
None
|
ERR3287691
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR14807564
|
Sensitive
|
lineage4.3.3;lineage4.8
|
None
|
SRR17657960
|
Other
|
lineage4.3.3
|
None
|
SRR28859922
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13267441
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29539658
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR4799047
|
RR-TB
|
lineage3
|
in
|
SAMEA2533915
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813007
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2446426
|
Sensitive
|
lineage4.3.3
|
nl
|
ERR3287610
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR551902
|
Sensitive
|
lineage4.3.3
|
de
|
ERR1193683
|
MDR-TB
|
lineage4.3.3
|
gn
|
ERR11068298
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4818583
|
Other
|
lineage4.3.3
|
None
|
ERR552260
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6480319
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751609
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR1034798
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813604
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13260279
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR2516885
|
MDR-TB
|
lineage4.3.3
|
gb
|
ERR7910859
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10680004
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394257
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6866695
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751548
|
Pre-XDR-TB
|
lineage4.3.3
|
pe
|
ERR751571
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287426
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR7069094
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11044850
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28409671
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28868564
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813079
|
MDR-TB
|
lineage4.3.3
|
pe
|
SAMEA5569996
|
MDR-TB
|
lineage4.3.2;lineage4.3.3
|
None
|
ERR551399
|
Sensitive
|
lineage4.3.3
|
None
|
ERR775338
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR6866277
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4815965
|
Sensitive
|
lineage4.3.3
|
gb
|
SRR20958114
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4819366
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4813073
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287634
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21657212
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4822600
|
XDR-TB
|
lineage4.3.3
|
de
|
SRR16370362
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10465745
|
Other
|
lineage4.3.3
|
None
|
SRR17234904
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR19241795
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393429
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR10680179
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4813339
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR19241783
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4797442
|
Sensitive
|
lineage4.3.3
|
in
|
ERR4813703
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516247
|
Sensitive
|
lineage4.3.3
|
be
|
SRR20958160
|
HR-TB
|
lineage4.3.3
|
None
|
SRR3732570
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2200133
|
Sensitive
|
lineage4.3.3
|
de
|
ERR1034673
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR1034757
|
MDR-TB
|
lineage4.3.3;lineage4.3.4.1
|
pe
|
ERR12118043
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13260208
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR751509
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4024938
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13290798
|
RR-TB
|
lineage4.3.3
|
None
|
SRR19241797
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21689490
|
Sensitive
|
lineage4.3.3
|
None
|
SRR13583332
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR553228
|
HR-TB
|
lineage4.3.3
|
None
|
ERR6866002
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29053322
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393968
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393553
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393843
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28394120
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393844
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261915
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393969
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393943
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393995
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR26112787
|
Sensitive
|
lineage4.3.3
|
None
|
ERR6865324
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR13261914
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29440628
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29772394
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29772454
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29126351
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29539573
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9121228
|
Sensitive
|
lineage4.3.3
|
None
|
SRR20958093
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29055726
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1034671
|
MDR-TB
|
lineage4.3.3
|
co
|
ERR10561933
|
Sensitive
|
lineage4.3.3
|
None
|
ERR10680138
|
MDR-TB
|
lineage4.3.3
|
None
|
SAMEA5569827
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3287813
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287732
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR3287818
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4822051
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393764
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393366
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28393431
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13276291
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR4024893
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4812958
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR4813342
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775358
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR19317569
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR751629
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR14782829
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393367
|
MDR-TB
|
lineage4.1.2.1;lineage4.3.3
|
None
|
SRR22461614
|
HR-TB
|
lineage4.3.3
|
None
|
SRR28393314
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13285693
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751365
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR28706508
|
Sensitive
|
lineage4.3.3
|
None
|
SRR29681473
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4815899
|
Other
|
lineage4.3.3
|
gb
|
ERR13260652
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR30182629
|
Sensitive
|
lineage4.3.3
|
None
|
SAMEA5569803
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR11067200
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4812474
|
Sensitive
|
lineage4.3.3
|
pe
|
SAMEA2534521
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11043374
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR21690213
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13261923
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR13261933
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2516628
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR21576591
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR9125338
|
Sensitive
|
lineage4.3.3
|
None
|
SRR6785372
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393909
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4814592
|
Other
|
lineage4.3.3
|
None
|
SRR14782226
|
Sensitive
|
lineage4.3.3
|
None
|
ERR6865881
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28170815
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1193875
|
MDR-TB
|
lineage4.3.3
|
sl
|
ERR2516490
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR775328
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR13261925
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1213923
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR11243595
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21240151
|
Sensitive
|
lineage4.3.3
|
None
|
SRR28393917
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR3275435
|
Sensitive
|
lineage4.3.3
|
nl
|
ERR3275633
|
Sensitive
|
lineage4.3.3
|
nl
|
ERR3132135
|
Other
|
lineage4.3.3
|
None
|
ERR3132174
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR29053398
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260161
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR11082691
|
Sensitive
|
lineage4.7
|
None
|
ERR10465855
|
Sensitive
|
lineage4.3.3
|
None
|
ERR1193868
|
HR-TB
|
lineage4.3.3
|
sl
|
ERR6879034
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28860008
|
Sensitive
|
lineage4.3.3
|
None
|
ERR779890
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR21690109
|
Sensitive
|
lineage4.3.3
|
None
|
SRR6831905
|
Sensitive
|
lineage4.3.3
|
None
|
ERR12117934
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR28393462
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4812806
|
MDR-TB
|
lineage4.3.3
|
pe
|
ERR7911367
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR7645897
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4407523
|
Sensitive
|
lineage4.3.3
|
None
|
ERR751616
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR29772620
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR30049954
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4195374
|
Sensitive
|
lineage4.3.3
|
None
|
SRR12931694
|
Sensitive
|
lineage4.3.3
|
None
|
SRR21658383
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11043846
|
Sensitive
|
lineage4.3.3
|
None
|
ERR13260237
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR2184276
|
Sensitive
|
lineage4.3.3
|
pe
|
ERR2510153
|
MDR-TB
|
lineage4.3.3
|
pe
|
SRR16370240
|
Sensitive
|
lineage4.3.3
|
None
|