EBG00000313325 - n.1264T>G
Drug resistance types
12 Sensitive
27 RR-TB
18 HR-TB
8 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
77 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage2.2.1 | 13 |
| lineage4.3.3 | 5 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 1 |
| 12 | |
| lineage4.3 | 1 |
| lineage4.1.2.1 | 12 |
| La1.2 | 3 |
| La1.3 | 1 |
| lineage4.9 | 20 |
| lineage1.1.3.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.3 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.2 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.8 | 17 |
| lineage4.3.4.2.1 | 2 |
| La1.6 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4 | 4 |
| La1.4 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage3 | 13 |
| lineage4.1.1.3 | 4 |
| lineage1.1.2 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8600046 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR184932 | Other | lineage2.2.1 | None | ERR3283055 | HR-TB | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4769427 | Other | La1.2 | None | ERR4769418 | Other | La1.2 | None | ERR4769479 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4796257 | Pre-XDR-TB | lineage2.2.1 | in | ERR9117826 | Other | lineage3.1.3 | None | ERR4811493 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140736 | RR-TB | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR16278274 | Other | La1.4 | None | SRR1173770 | Other | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR11972206 | HR-TB | lineage1.1.3.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR16278292 | Other | La1.4 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4817389 | Other | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4817434 | Other | lineage3 | None | ERR2229801 | Other | lineage4 | None | ERR4816852 | Other | lineage4.9 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2228910 | Other | lineage4.8 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SAMEA3450033 | Other | lineage4.8 | None | ERR2446566 | Other | lineage4.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2513476 | Sensitive | lineage4.1.2.1 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4819383 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514576 | Other | lineage4.8 | gb | SRR5341456 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514679 | HR-TB | lineage2.2.1 | gb | ERR4819910 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4820130 | Other | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5431730 | Other | La1.8.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821366 | Sensitive | lineage3.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR6045683 | Other | lineage3.1.2 | None | SRR6045726 | Other | lineage3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6044904 | Other | lineage3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046442 | Other | lineage3 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4972536 | XDR-TB | lineage4.3.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982070 | RR-TB | None | ERR3275190 | Other | lineage3 | nl | SRR6981912 | Sensitive | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None |
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