EBG00000313325 - n.1381C>G
Drug resistance types
9 Sensitive
19 RR-TB
6 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 8 |
| lineage4.9 | 7 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 2 |
| 1 | |
| lineage4.8 | 30 |
| lineage3.1.2 | 1 |
| lineage4 | 4 |
| lineage4.1.1.3 | 2 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.3 | 3 |
| lineage3 | 6 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.9;lineage4.6.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| La1.8.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 87 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR11972206 | HR-TB | lineage1.1.3.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | ERR4815414 | Other | None | ERR4815800 | Other | lineage4.8 | None | ERR4815216 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | SRR3675219 | Other | lineage4.9 | None | SRR3675459 | Other | lineage3.1.2 | gb | ERR2229541 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2229147 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229148 | Other | lineage4.8 | dk | ERR2229811 | Other | lineage4.8 | dk | ERR2229801 | Other | lineage4 | None | ERR2229249 | Sensitive | lineage4.8 | dk | ERR2229366 | Other | lineage4.8 | None | ERR2229690 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2229505 | Other | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228910 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR2515011 | Other | lineage4.1.2.1 | gb | ERR4818149 | Other | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2512689 | Other | lineage4.3.3 | gb | ERR2514305 | Other | lineage3 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | ERR2512497 | Other | lineage4.6.2.2 | gb | ERR4818583 | Other | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819815 | Sensitive | lineage4.9 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4820100 | Other | lineage4.3.3 | None | ERR4820130 | Other | lineage3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821332 | Other | lineage4.1.2.1 | gb | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4822157 | Sensitive | lineage4;lineage2.2.1 | gb | ERR4822058 | Sensitive | lineage4.1.2.1 | gb | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR5818683 | Sensitive | lineage3.1.1 | dj | ERR4828879 | MDR-TB | lineage3 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR017781 | Other | lineage3 | None | SRR6650133 | Other | lineage2.2.1 | None | SRR6797613 | Other | lineage4.3.4.2 | None | SRR6964650 | Sensitive | lineage3 | None | SRR7517756 | MDR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR7517755 | HR-TB | lineage1.2.1.2.1 | None | ERR019855 | Other | lineage3 | None | ERR4407552 | Sensitive | lineage4.1.2.1 | None | ERR019851 | RR-TB | lineage4.9 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR5864651 | MDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None |
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