lineage | Count |
---|---|
lineage4.9 | 31 |
lineage3.1.2.1 | 1 |
lineage4.2;lineage4.9 | 2 |
lineage4.9;lineage7 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1 | 15 |
lineage2.2.2 | 1 |
lineage4.6.2.2 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.3 | 1 |
lineage4.5 | 1 |
lineage4.2;lineage4.8.1;lineage4.9 | 2 |
lineage4.4.2 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage3;lineage4 | 1 |
lineage2;lineage4 | 1 |
lineage3 | 3 |
lineage4.3.2.1 | 2 |
lineage1.2.2.2 | 1 |
La1.3 | 1 |
lineage4.8 | 1 |
lineage4.3.3 | 1 |
lineage4.2.1 | 1 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | SRR6044835 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR176741 | Other | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR108125 | RR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR9786076 | Sensitive | lineage3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4821143 | Other | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR6046376 | Other | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None |
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