EBG00000313325 - n.726G>T
Drug resistance types
16 Sensitive
22 RR-TB
4 HR-TB
12 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.9 | 22 |
| lineage4.8 | 27 |
| lineage3 | 4 |
| 1 | |
| lineage4 | 4 |
| lineage4.5 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1 | 8 |
| lineage4.3.3 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.2.1 | 1 |
| La1.8.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage5 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage6 | 1 |
| La1.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR15600379 | MDR-TB | lineage2.2.1.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18572455 | Sensitive | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3082068 | Sensitive | lineage4.8 | None | SRR3085327 | Sensitive | lineage4.8 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229733 | Other | lineage4.8 | dk | ERR2229198 | MDR-TB | lineage4.8 | None | SRR3675587 | Sensitive | lineage3 | None | SRR5818426 | Other | None | ERR2229366 | Other | lineage4.8 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2229801 | Other | lineage4 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229436 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228910 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR2229523 | Sensitive | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818234 | Sensitive | lineage4.9 | None | ERR4818224 | Sensitive | lineage4.4.1.1 | None | ERR4819568 | Sensitive | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR5152936 | MDR-TB | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4819701 | Sensitive | lineage4.9 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4819910 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4822157 | Sensitive | lineage4;lineage2.2.1 | gb | SRR5818402 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4828879 | MDR-TB | lineage3 | None | ERR4828977 | MDR-TB | lineage4.2.1 | it | ERR4830778 | Pre-XDR-TB | lineage4.5 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR8600288 | Other | La1.8.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR5087596 | Other | La1.8.1 | None | SRR9971339 | MDR-TB | lineage4.3.3 | None | DRR034348 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR019855 | Other | lineage3 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR4192364 | Sensitive | lineage5 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4187652 | Other | lineage4.9 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4407536 | Sensitive | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | SRR1173749 | Sensitive | lineage1.1.2 | None | ERR9787033 | Sensitive | lineage6 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | ERR6338285 | Other | La1.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR11972182 | MDR-TB | lineage2.2.1 | None | SRR11972432 | MDR-TB | lineage2.2.1 | None |
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