EBG00000313325 - n.1443C>T
Drug resistance types
114 Sensitive
6 RR-TB
31 HR-TB
15 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
96 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2 | 4 |
| La1.7.1 | 2 |
| lineage2.2.1 | 26 |
| lineage2.2 | 6 |
| lineage4.1.1 | 9 |
| lineage1.1.3.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.1 | 1 |
| lineage4.3.3 | 10 |
| lineage4 | 52 |
| lineage4.9 | 39 |
| lineage4.1.1.3 | 5 |
| lineage4.3.4.2 | 3 |
| 23 | |
| lineage4.3.4.2.1 | 3 |
| lineage3.1.1 | 3 |
| lineage4.1.2.1 | 13 |
| lineage4.8 | 6 |
| lineage4.8.1 | 1 |
| lineage3 | 11 |
| lineage4.2.1 | 2 |
| lineage4.3.2.1 | 7 |
| lineage6 | 1 |
| lineage5.1.4 | 1 |
| lineage4.7 | 3 |
| lineage4.1.2 | 3 |
| lineage4.5 | 2 |
| lineage1.1.2 | 2 |
| lineage4;lineage3 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.6 | 2 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.4 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.1 | 1 |
| La2 | 1 |
| lineage4.1.4 | 1 |
| La1.8.1 | 1 |
| lineage5.1.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.8;lineage4.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 270 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18213800 | Other | lineage3.1.2 | None | SRR18391772 | Other | La1.7.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR21595935 | Other | lineage2.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR21595944 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21676524 | Sensitive | lineage4.3.3 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21728162 | Sensitive | lineage4.3.3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675460 | Sensitive | lineage4.1.1.3 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815459 | Sensitive | lineage4.3.4.2 | gb | ERR3275450 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161149 | Other | lineage4.3.4.2.1 | mw | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4814901 | Other | lineage2.2.1 | gb | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | ERR4815849 | Other | lineage3.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817475 | Other | lineage4.1.1.3 | gb | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR2510768 | Other | lineage4.8 | it | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818176 | Other | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4818574 | Other | lineage6 | None | ERR4819087 | Other | lineage4.3.3 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR2514652 | Other | lineage4.7 | gb | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR2446382 | Other | lineage4 | None | ERR2179725 | Sensitive | lineage4.5 | cn | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR2514929 | HR-TB | lineage1.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820885 | Sensitive | lineage4.8 | gb | ERR4821229 | Other | lineage2.2.1 | None | ERR4821120 | Other | lineage4.1.2.1 | gb | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045614 | Other | lineage4.8 | None | SRR6046210 | Other | lineage4 | None | ERR4822171 | Other | lineage3 | gb | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045086 | Other | lineage3 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045992 | Other | lineage3 | None | SRR6045997 | Other | lineage3.1.3 | gb | SRR6046177 | Other | lineage3.1.2 | None | SRR6046397 | Other | None | SRR6046245 | Other | lineage4.9 | None | ERR4829359 | Other | lineage4.7 | None | ERR4829232 | Other | lineage1.1.3.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4828811 | Other | lineage4.1.1 | None | ERR4828805 | Other | lineage4.6 | None | ERR4831638 | Sensitive | None | SRR6046761 | Other | lineage3 | gb | SRR6046897 | Sensitive | lineage4 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4831990 | HR-TB | lineage1.1.1.1 | vn | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR294266 | HR-TB | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR502943 | HR-TB | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR502524 | HR-TB | La2 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR7131132 | Other | lineage1.1.3.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131161 | Other | lineage4.8 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323039 | HR-TB | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR1193719 | Sensitive | lineage4.3.3 | cn | ERR323053 | HR-TB | None | ERR10796629 | Other | lineage4 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3439550 | Other | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400345 | Other | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5865950 | MDR-TB | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6197032 | Other | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | ERR987722 | HR-TB | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR990545 | Other | lineage3 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1175508 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173788 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR13199746 | Other | La1.7.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR13199734 | Other | La1.2 | None | SRR17832802 | HR-TB | lineage3 | None |
|---|
