EBG00000313325 - n.1443C>T


Drug resistance types
114 Sensitive 6 RR-TB 31 HR-TB 15 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
lineage3.1.2 4
La1.7.1 2
lineage2.2.1 26
lineage2.2 6
lineage4.1.1 9
lineage1.1.3.2 2
lineage4.4.1.1 2
lineage2.2.1.1 5
lineage4.1 1
lineage4.3.3 10
lineage4 52
lineage4.9 39
lineage4.1.1.3 5
lineage4.3.4.2 3
23
lineage4.3.4.2.1 3
lineage3.1.1 3
lineage4.1.2.1 13
lineage4.8 6
lineage4.8.1 1
lineage3 11
lineage4.2.1 2
lineage4.3.2.1 7
lineage6 1
lineage5.1.4 1
lineage4.7 3
lineage4.1.2 3
lineage4.5 2
lineage1.1.2 2
lineage4;lineage3 1
lineage3.1.3 1
lineage1.1.3.1 2
lineage4.6 2
lineage4.2.1.1 1
lineage1.1.1.1 1
lineage4.6.2.2 3
lineage4.4 1
lineage4.3 1
lineage4.3.4.1 1
La2 1
lineage4.1.4 1
La1.8.1 1
lineage5.1.2 1
lineage4.6.5 2
lineage4.8;lineage4.1 1
lineage3.1.2.2;lineage3.1.2.1 1
La1.2 1
spoligotype Counts
spoligotype Count
None 270
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18213800 Other lineage3.1.2 None
SRR18391772 Other La1.7.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR2101774 Sensitive lineage2.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR21595935 Other lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR21277822 Sensitive lineage2.2.1.1 None
SRR21595944 Other lineage2.2.1 None
SRR12708416 Sensitive lineage4.1 None
SRR21676524 Sensitive lineage4.3.3 None
SRR21714045 HR-TB lineage2.2.1 None
SRR21728162 Sensitive lineage4.3.3 None
SRR3675455 Sensitive lineage4 None
SRR3675283 Sensitive lineage4.9 None
SRR3675460 Sensitive lineage4.1.1.3 None
SRR3675473 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3675496 Other lineage4.1.1.3 gb
SRR3675209 Sensitive lineage4.9 None
ERR4815459 Sensitive lineage4.3.4.2 gb
ERR3275450 Other lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675279 Other None
SRR3675472 Sensitive lineage4.9 None
SRR3675477 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR161034 Other lineage4.3.4.2.1 None
ERR161149 Other lineage4.3.4.2.1 mw
SRR3675210 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
ERR4814901 Other lineage2.2.1 gb
SRR3675514 Sensitive lineage4.9 None
SRR3675387 Sensitive None
SRR3675292 Sensitive lineage4 None
SRR3675318 Other lineage4.9 None
ERR176740 HR-TB None
ERR4815849 Other lineage3.1.1 None
SRR3675548 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675537 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675553 Sensitive lineage4.9 None
ERR212001 HR-TB None
SRR3675571 HR-TB None
SRR3675577 Sensitive lineage4.9 None
ERR4817475 Other lineage4.1.1.3 gb
ERR4816904 Sensitive lineage4.1.2.1 None
ERR2229332 RR-TB lineage4.8 None
ERR4818188 Other lineage4.1.2.1 None
ERR4817853 Other lineage4.8.1 None
ERR2510768 Other lineage4.8 it
ERR2513438 Sensitive lineage4.1.2.1 None
ERR4818810 Other lineage2.2.1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4818176 Other lineage4.1.2.1 None
ERR4817998 Other lineage3 None
ERR2512770 Other lineage4.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
ERR4818574 Other lineage6 None
ERR4819087 Other lineage4.3.3 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR2513283 Other lineage5.1.4 None
ERR4818583 Other lineage4.3.3 None
SRR5341396 Other lineage4 None
SRR5341437 Sensitive lineage4.9 None
ERR4819636 Other lineage3.1.2 None
ERR2514552 Sensitive lineage3 None
ERR2515854 Sensitive lineage2.2.1 None
ERR2514652 Other lineage4.7 gb
SRR5341296 Sensitive lineage4.9 None
ERR4820827 Other lineage4.1.2 None
ERR2446382 Other lineage4 None
ERR2179725 Sensitive lineage4.5 cn
ERR4820043 Sensitive lineage4.1.2.1 None
ERR2514929 HR-TB lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
ERR4820885 Sensitive lineage4.8 gb
ERR4821229 Other lineage2.2.1 None
ERR4821120 Other lineage4.1.2.1 gb
SRR5341345 Sensitive lineage4.9 None
ERR2517475 Other lineage4 None
SRR5341470 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045614 Other lineage4.8 None
SRR6046210 Other lineage4 None
ERR4822171 Other lineage3 gb
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045726 Other lineage3 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6045036 Other lineage4;lineage3 None
SRR6045086 Other lineage3 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045992 Other lineage3 None
SRR6045997 Other lineage3.1.3 gb
SRR6046177 Other lineage3.1.2 None
SRR6046397 Other None
SRR6046245 Other lineage4.9 None
ERR4829359 Other lineage4.7 None
ERR4829232 Other lineage1.1.3.1 None
SRR6046611 HR-TB lineage4.9 None
ERR4828811 Other lineage4.1.1 None
ERR4828805 Other lineage4.6 None
ERR4831638 Sensitive None
SRR6046761 Other lineage3 gb
SRR6046897 Sensitive lineage4 None
SRR6397640 Other lineage4.2.1.1 None
ERR4831546 HR-TB lineage2.2 None
SRR6046863 Sensitive lineage1.1.2 None
ERR4831990 HR-TB lineage1.1.1.1 vn
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6856087 Sensitive lineage4 None
ERR4831839 MDR-TB lineage2.2.1 None
SRR6982102 Other lineage2.2.1 None
SRR6982427 Sensitive lineage4.1.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982195 RR-TB lineage4.4 None
SRR6981939 Sensitive lineage4.3.4.2.1 None
SRR6982227 Other lineage4.1.1 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6855721 Sensitive lineage4.3.2.1 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6982011 Other lineage4.1.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982035 Sensitive lineage4.9 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982057 Pre-XDR-TB lineage4.3 None
SRR6982484 Sensitive lineage3.1.1 None
SRR6982075 Sensitive lineage3 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR294266 HR-TB None
SRR6982558 Other lineage4.3.4.2 None
ERR502943 HR-TB None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
ERR502524 HR-TB La2 None
SRR6982514 Sensitive lineage4.3.3 None
SRR7131132 Other lineage1.1.3.1 None
SRR7131068 Other lineage4.8 None
SRR7131061 Other lineage2.2.1 None
SRR7131296 Other lineage4.3.3 None
SRR7131161 Other lineage4.8 None
SRR7131275 Other lineage4.1.2.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR8649119 Other lineage4.6 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR323039 HR-TB None
ERR3324351 MDR-TB lineage4.1.4 None
ERR10796581 HR-TB lineage4.1.2 None
ERR1193719 Sensitive lineage4.3.3 cn
ERR323053 HR-TB None
ERR10796629 Other lineage4 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3439550 Other La1.8.1 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363445 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR400320 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR400345 Other lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4769525 Sensitive lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR4797313 HR-TB None
ERR4798431 HR-TB None
ERR6865513 Other lineage4.1.2.1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4811030 Sensitive None
ERR4812155 Sensitive None
ERR5865950 MDR-TB lineage2.2.1 None
ERR6865502 Sensitive lineage4 None
ERR4798504 Other lineage3 None
ERR4811031 Sensitive lineage4.5 None
ERR6197032 Other lineage4.9 None
ERR7801175 RR-TB lineage4.6.5 None
ERR736865 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR7801176 RR-TB lineage4.6.5 None
ERR7801314 Sensitive lineage4.3.4.2 None
ERR987722 HR-TB None
ERR9117681 Other lineage4.3.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786843 Other None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR990545 Other lineage3 None
SRR1172146 Sensitive lineage4.9 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR1175508 Other lineage4.9 None
SRR1172310 HR-TB None
SRR1173788 Other None
SRR1175496 HR-TB lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1172214 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1175507 MDR-TB lineage4 None
SRR1180270 Other lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183049 Other lineage2.2 None
SRR13199746 Other La1.7.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR13199734 Other La1.2 None
SRR17832802 HR-TB lineage3 None