EBG00000313325 - n.1443C>T
Drug resistance types
192 Sensitive
8 RR-TB
17 HR-TB
18 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 166 |
| lineage4.4.1.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage3 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3.3 | 15 |
| lineage4.3.2.1 | 6 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1 | 17 |
| lineage4.1.2.1 | 8 |
| lineage4.1.1.1 | 6 |
| lineage1.1.3.2 | 1 |
| La1.7.1 | 3 |
| lineage5.1.2 | 1 |
| La1.2 | 1 |
| lineage2.2.1.1 | 5 |
| 4 | |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.8.1 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 3 |
| lineage4.1;lineage4.8 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.6.5 | 2 |
| lineage4.1.2 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.3.4.2 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 3 |
| lineage4.2.1 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 296 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675548 | Sensitive | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR1215023 | Sensitive | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1449772 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR1215666 | Sensitive | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR1218497 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR990545 | Other | lineage3 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR3675387 | Other | lineage4.9 | None | SRR1221383 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR1219228 | Sensitive | lineage4.9 | None | SRR13199746 | Other | La1.7.1 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR1223172 | Sensitive | lineage4.9 | None | SRR1215683 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR1231404 | Sensitive | lineage4.9 | None | SRR1225793 | Sensitive | lineage4.9 | None | SRR1226258 | Sensitive | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1223369 | Sensitive | lineage4.9 | None | SRR18914029 | Sensitive | lineage4.3.3 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1233446 | Sensitive | lineage4.9 | None | SRR1218628 | Sensitive | lineage4.9 | None | SRR1220002 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1215350 | Sensitive | lineage4.9 | None | SRR1221325 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR6982075 | Sensitive | lineage4.9 | None | SRR1223515 | Sensitive | lineage4.9 | None | SRR1231395 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR1227202 | Sensitive | lineage4.9 | None | SRR1228490 | Sensitive | lineage4.9 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1222248 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1218496 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR1218967 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4818188 | Other | lineage4.1.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR13292476 | Sensitive | lineage4.3.3 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR1221323 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4178226 | Sensitive | lineage4 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR1215931 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR5007155 | Sensitive | lineage4.1.2.1 | None | SRR1222235 | Sensitive | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR1221597 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR1220590 | Sensitive | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR21676524 | Sensitive | lineage4.3.3 | None | SRR1222363 | Sensitive | lineage4.9 | None | SRR1221276 | Sensitive | lineage4.9 | None | SRR1226261 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR21728162 | Sensitive | lineage4.3.3 | None | SRR1222769 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1223431 | Sensitive | lineage4.9 | None | SRR1227207 | Sensitive | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1232815 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR1214426 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR1221546 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1232997 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1218972 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1221158 | Sensitive | lineage4.9 | None | SRR1221501 | Sensitive | lineage4.9 | None | SRR1229697 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR7131275 | Other | lineage4.1.2.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR1231621 | Sensitive | lineage4.9 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1221630 | Sensitive | lineage4.9 | None | SRR1227328 | Sensitive | lineage4.9 | None | SRR1232049 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1232818 | Sensitive | lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | SRR1222500 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6045036 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR5865950 | MDR-TB | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1218649 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1449380 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046210 | Other | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7236253 | Other | La1.7.1 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR7069704 | Sensitive | lineage4.3.3 | None | SRR7240324 | Other | La1.8.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR1223229 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR18391772 | Other | La1.7.1 | None | SRR1233306 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR29055563 | Sensitive | lineage4.3.3 | None | ERR400345 | Other | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR1215285 | Sensitive | lineage4.9 | None | SRR1232075 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR1462083 | Sensitive | lineage4.9 | None | SRR1232756 | Sensitive | lineage4.9 | None | SRR1222257 | Sensitive | lineage4.9 | None | SRR1229448 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1227052 | Sensitive | lineage4.9 | None | SRR6982427 | Sensitive | lineage4.1.1.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1232504 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1230423 | Sensitive | lineage4.9 | None | SRR1221471 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1220619 | Sensitive | lineage4.9 | None | SRR1214439 | Sensitive | lineage4.9 | None | SRR26112125 | Sensitive | lineage4.3.3 | None | SRR3675542 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR29440817 | Sensitive | lineage4.9 | None | SRR1221454 | Sensitive | lineage4.9 | None | SRR1214953 | Sensitive | lineage4.9 | None | ERR9117681 | Sensitive | lineage4.3.3 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | ERR1193719 | Sensitive | lineage4.3.3 | cn | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1449743 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR1221012 | Sensitive | lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR26112453 | Sensitive | lineage4.3.3 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR1214883 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1232745 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR1220260 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1229601 | Sensitive | lineage4.9 | None | SRR1223503 | Sensitive | lineage4.9 | None | SRR1410051 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR1232622 | Sensitive | lineage4.9 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1232624 | Sensitive | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None |
|---|
