lineage | Count |
---|---|
lineage3 | 52 |
lineage4.8 | 33 |
lineage4.3.3 | 4 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1;lineage4.5 | 1 |
La1.8.1 | 1 |
lineage3;lineage4.1 | 1 |
lineage3;lineage4.2.2.2 | 1 |
lineage2.2.1 | 1 |
M.canetti;lineage2.1;lineage3 | 1 |
spoligotype | Count |
---|---|
None | 96 |
ID | Drug resistance | Lineage | Country iso2 | ERR2514011 | Sensitive | lineage3 | gb | ERR4798210 | HR-TB | lineage3 | in | ERR4797684 | Sensitive | lineage3 | in | SRR28858393 | Sensitive | lineage4.8 | None | SRR6797380 | Sensitive | lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4797675 | Sensitive | lineage3 | in | ERR4800040 | Sensitive | lineage3 | in | SRR22249647 | HR-TB | lineage3 | None | ERR4797838 | Sensitive | lineage3 | in | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR911929 | Other | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | SRR1062924 | Sensitive | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR4798299 | Sensitive | lineage3 | in | ERR978734 | RR-TB | lineage4.8 | None | SRR2100866 | HR-TB | lineage3 | None | SRR22179531 | Other | lineage3 | None | ERR978694 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR11050501 | Sensitive | lineage3 | None | SAMN02360623 | Sensitive | lineage3 | ug | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4798214 | Sensitive | lineage3 | in | ERR978755 | RR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1003133 | Sensitive | lineage3 | None | ERR978756 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | SAMN02381034 | Sensitive | lineage3 | ug | SRR22137386 | Other | lineage3 | None | ERR13285522 | Other | lineage3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR1003114 | Sensitive | lineage3 | None | ERR978762 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | SRR1049717 | Sensitive | lineage3 | None | SRR27450592 | Sensitive | lineage3 | None | ERR911930 | Other | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR6964514 | Pre-XDR-TB | lineage3 | None | SRR1003132 | Sensitive | lineage3 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR1049718 | Sensitive | lineage3 | None | ERR978747 | Other | lineage4.8 | None | ERR270765 | HR-TB | lineage3 | None | ERR13292209 | Sensitive | lineage3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4831045 | Sensitive | lineage3 | np | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR28044439 | Sensitive | lineage3 | None | SRR7236108 | Other | La1.8.1 | None | SRR6797601 | Sensitive | lineage3 | None | ERR4814477 | MDR-TB | lineage3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR13272923 | Sensitive | lineage3 | None | SRR26112100 | Sensitive | lineage3 | None | SRR7070217 | Sensitive | lineage3 | None | SRR5341385 | Pre-XDR-TB | lineage3 | in | SRR28357651 | Sensitive | lineage4.8 | None | SRR18910203 | Sensitive | lineage3 | None | ERR978727 | Other | lineage4.8 | None | ERR2514892 | Sensitive | lineage3 | gb | ERR4800655 | MDR-TB | lineage3 | None | ERR978751 | Other | lineage4.8 | None | ERR4831068 | Sensitive | lineage3;lineage4.1 | np | SRR29126420 | Sensitive | lineage3 | None | ERR978761 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR13265829 | Sensitive | lineage3 | None | ERR978752 | Other | lineage4.8 | None | ERR4800204 | Sensitive | lineage3 | in | SRR19428561 | Sensitive | lineage3;lineage4.2.2.2 | None | SRR1003115 | Sensitive | lineage3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR4423147 | Pre-XDR-TB | lineage3 | None | SRR1140738 | Sensitive | lineage3 | None | SRR2100852 | HR-TB | lineage3 | None | DRR034348 | Other | lineage2.2.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | ERR13266765 | MDR-TB | lineage3 | None | SAMN02360630 | Sensitive | lineage3 | ug | SRR19428552 | Sensitive | lineage3 | None | ERR4800175 | Sensitive | lineage3 | None | ERR270750 | HR-TB | lineage3 | None | ERR11049584 | Sensitive | lineage3 | None | ERR11081358 | Sensitive | lineage3 | None |
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