EBG00000313325 - n.468delGinsCA


Drug resistance types
20 Sensitive 5 RR-TB 43 HR-TB 6 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 34 Other
lineage Counts
lineage Count
lineage4.9 42
lineage4.1.1.3 2
La1.3 3
lineage2.2.1 11
La3;lineage4.9 5
lineage1.1.1.1 1
lineage1.1.3.3 1
lineage4.8 3
La1.8.1 4
La1.7.1 1
lineage3.1.2.1 1
lineage3 4
La1.7.1;La1.7.X-unk4 1
lineage4.3.2.1 2
La1;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage6 1
lineage4.3.3 3
lineage4.2;lineage4.9 1
lineage1.1.3.1 1
lineage4.1.2 1
La1.7;lineage4.9;lineage7 1
lineage4 2
lineage4.3.4.2.1 1
lineage1;lineage4.9 1
lineage3.1.2.2 1
lineage2.2;lineage4 1
La1.7.1;lineage4.9 1
M.canetti;lineage4.9 1
La1;lineage4.1.2 1
La1.2.BCG 1
La3;lineage4 1
lineage4.3.4 1
lineage4.4.1.1.1 1
lineage4.3.4.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
La1.2;La1.8.1 1
lineage2.2.2 1
lineage1.2.2.2 1
spoligotype Counts
spoligotype Count
None 111
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176779 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
ERR1063858 HR-TB lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
SRR12708392 Other lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR2515230 Sensitive lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR3283031 Other La3;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR12708415 HR-TB lineage2.2.1 None
SRR16156817 Other lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR10315567 HR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4769552 Sensitive La1.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9787362 Sensitive lineage6 None
SRR12708409 HR-TB lineage4.3.3 None
ERR6359069 HR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR6358979 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6045832 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283030 HR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3797019 Other La1.8.1 None
ERR176778 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR22424787 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6855695 Sensitive lineage4.8 None
ERR1063846 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR4818583 Other lineage4.3.3 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4819863 RR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR6045359 HR-TB lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR13423649 Other lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR3797079 Sensitive lineage4.9 None
SRR13180204 Other lineage3 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR2513259 Other lineage3 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9787256 Other lineage6.1.3 None
ERR4769514 Other La1.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR7236177 Other La1.8.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR26159063 RR-TB lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR1063849 HR-TB lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR9971270 RR-TB lineage2.2.1 None
ERR3273109 HR-TB lineage4 None