EBG00000313325 - n.1254T>G
Drug resistance types
62 Sensitive
21 RR-TB
8 HR-TB
13 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 15 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.8 | 23 |
| lineage2.2 | 1 |
| lineage2.2.1 | 23 |
| lineage4.1.2.1 | 12 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 9 |
| 3 | |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.1 | 5 |
| lineage4.1.2 | 2 |
| La1.8.1 | 5 |
| lineage4.3 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage6.3.1 | 2 |
| La1.3 | 7 |
| La1.2 | 1 |
| lineage4.9 | 11 |
| lineage4.9;La1.3 | 3 |
| lineage4.2.1 | 1 |
| lineage1.1.3.2 | 3 |
| lineage4.3.3 | 4 |
| lineage4.6.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2.2.2 | 4 |
| lineage1.2.2.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage3.1.1 | 3 |
| lineage4.2.2.1 | 1 |
| La1.4 | 1 |
| lineage4 | 6 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.4 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828879 | MDR-TB | lineage3 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6981912 | Sensitive | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | ERR3275190 | Other | lineage3 | nl | SRR6982014 | Other | lineage4.1.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982070 | RR-TB | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR8600046 | Other | La1.8.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324354 | Sensitive | lineage4.8 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769404 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | ERR5864323 | MDR-TB | lineage4.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR751569 | MDR-TB | lineage4.3.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9117826 | Other | lineage3.1.3 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR9787167 | Sensitive | lineage6.3.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1169203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1169301 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1169167 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972206 | HR-TB | lineage1.1.3.1 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR13180205 | Sensitive | lineage4.1.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180206 | Sensitive | lineage4.8 | None | SRR14296220 | Other | La1.8.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR2100537 | Sensitive | lineage3 | None | SRR2100532 | Sensitive | lineage3 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR181864 | Sensitive | lineage3.1.1 | None | ERR4816470 | Other | lineage3 | None | ERR2179857 | RR-TB | lineage4 | None | ERR2229540 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2516375 | MDR-TB | lineage4.3.3 | None | ERR4816322 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR228175 | Sensitive | lineage3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR2229801 | Other | lineage4 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4817434 | Other | lineage3 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR228180 | Sensitive | lineage3 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR2515364 | Sensitive | lineage4.1.2 | za | ERR4818261 | Other | lineage1.1.2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2513259 | Other | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR2513273 | Other | lineage4.1.2.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR2513476 | Sensitive | lineage4.1.2.1 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2515484 | Other | lineage4.8 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR4820130 | Other | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR2514328 | Sensitive | lineage4.1.2.1 | gb | ERR2514576 | Other | lineage4.8 | gb | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | ERR2514679 | HR-TB | lineage2.2.1 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4819910 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR2516270 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045480 | Other | lineage4.1.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821725 | Other | lineage4.8.2 | gb | ERR2660524 | HR-TB | lineage1.1.3.2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None |
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