EBG00000313339 - n.2702C>T
Drug resistance types
74 Sensitive
7 RR-TB
24 HR-TB
28 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 21 |
| lineage4;lineage2.2.1 | 1 |
| lineage2.2.2 | 2 |
| La1.7.1 | 1 |
| lineage4.8 | 8 |
| lineage4.9 | 16 |
| lineage3.1.1 | 3 |
| lineage3 | 10 |
| lineage1.1.3.2 | 2 |
| lineage4 | 5 |
| lineage4.3.4.2.1 | 14 |
| lineage4.4.1.1 | 7 |
| lineage4.9.1 | 3 |
| lineage4.6.4 | 2 |
| lineage1.2.2.1 | 2 |
| lineage4.1.2.1 | 16 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1 | 1 |
| 3 | |
| lineage4.6.2.2 | 6 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4.1.2 | 4 |
| lineage4.5 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 10 |
| lineage4.2.1.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage2.2 | 1 |
| La1.8.1 | 5 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1 | 6 |
| lineage4.6 | 1 |
| lineage1.2.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8;lineage2.2.1 | 1 |
| lineage4.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4 | 1 |
| La1.8 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.2.1 | 2 |
| La1.6 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 37 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002911 | Sensitive | lineage4;lineage2.2.1 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR18002996 | MDR-TB | lineage2.2.2 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR18003041 | HR-TB | lineage2.2.1 | None | SRR18053779 | Other | La1.7.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR4815236 | Sensitive | lineage2.2.1 | gb | ERR176785 | Sensitive | lineage3 | mw | ERR176796 | Sensitive | lineage1.1.3.2 | mw | ERR4815197 | Other | lineage4 | None | ERR176801 | Sensitive | lineage4.3.4.2.1 | mw | ERR4815261 | Other | lineage4.8 | gb | ERR4815257 | HR-TB | lineage4.4.1.1 | None | ERR176811 | Sensitive | lineage4.9.1 | None | ERR161113 | Other | lineage4.8 | mw | ERR176814 | Sensitive | lineage4.3.4.2.1 | mw | ERR4814429 | Other | lineage3 | gb | ERR190392 | Sensitive | lineage4.9.1 | mw | ERR1679639 | Other | lineage4.6.4 | None | ERR181771 | Sensitive | lineage3.1.1 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | ERR163963 | Sensitive | lineage1.2.2.1 | mw | ERR3275866 | Other | lineage4.1.2.1 | nl | SRR3675261 | Other | lineage1.2.1.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR176489 | Sensitive | lineage4.3.4.2.1 | None | ERR4815488 | HR-TB | lineage4.4.1 | None | ERR176565 | Sensitive | lineage4.3.4.2.1 | None | ERR176740 | HR-TB | None | ERR176619 | Sensitive | lineage4.9 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR212036 | Sensitive | lineage4.8 | mw | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR2027278 | Sensitive | lineage1.1.1.1 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR2027277 | Other | lineage4.8 | None | ERR212028 | Sensitive | lineage4.3.4.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR212084 | Sensitive | lineage1.2.2.1 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR3276277 | MDR-TB | lineage2.2.1 | nl | ERR216953 | Sensitive | lineage4.3.4.2.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR221563 | Sensitive | lineage1.1.3.2 | mw | ERR4817709 | HR-TB | lineage4.6.2.2 | gb | ERR4819015 | Sensitive | lineage4.6.2.2 | gb | ERR4818853 | Other | lineage4.1.2 | gb | ERR4818190 | Other | lineage4.8 | None | ERR2515055 | Other | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2513184 | Sensitive | lineage2.2.1 | gb | ERR2513210 | Sensitive | lineage3 | gb | ERR2179695 | Sensitive | lineage4.5 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR3276106 | Sensitive | lineage4.4.1.1 | nl | ERR245848 | Sensitive | lineage4.3.4.2.1 | mw | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4817607 | Sensitive | lineage4.2.1.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2513710 | HR-TB | lineage4.1.2.1 | gb | ERR2513758 | Sensitive | lineage4.3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | SRR5217421 | Sensitive | lineage2.2.1 | None | ERR2514151 | Other | lineage3 | gb | ERR4820468 | Sensitive | lineage3 | gb | ERR4819784 | Other | lineage4.1.2.1 | None | SAMN02403610 | MDR-TB | lineage4.1.1.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4821808 | Sensitive | lineage3 | gb | ERR4821109 | Other | lineage4.1.2.1 | None | ERR4821054 | Other | lineage3 | None | ERR2843511 | Sensitive | lineage2.2 | None | ERR2747678 | Other | La1.8.1 | None | ERR4821249 | Other | lineage4.6.4 | gb | SRR5818664 | Sensitive | lineage4.7 | None | SAMN02403513 | MDR-TB | lineage4.3.3 | za | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR3276233 | Sensitive | lineage4.1.2.1 | nl | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044916 | Other | lineage4.1.1 | None | SRR6046888 | MDR-TB | lineage3 | gb | SRR6480571 | MDR-TB | lineage2.2.2 | None | ERR4872099 | MDR-TB | lineage4.6.2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6650411 | Sensitive | lineage1.1.3.1 | None | ERR3276155 | Other | lineage4.1.2.1 | nl | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6896301 | Sensitive | lineage4.3.3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982552 | HR-TB | lineage1.2.2 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6896504 | Sensitive | lineage2.2.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR8600127 | Other | La1.8.1 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR036200 | Sensitive | lineage4.1.2 | None | ERR323041 | HR-TB | None | SRR9971192 | MDR-TB | lineage4.4.1.1.1 | None | ERR323061 | Sensitive | lineage4.9 | None | DRR184902 | Sensitive | lineage4.8;lineage2.2.1 | vn | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR10796593 | RR-TB | lineage4 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR037513 | Sensitive | lineage4.3.4.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR1063888 | HR-TB | lineage1.1.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796599 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR3283041 | Other | lineage4.9 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3439224 | Other | La1.8.1 | None | ERR3439232 | Other | La1.8.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR3439280 | Other | La1.8 | None | ERR3439277 | Sensitive | lineage4.9 | None | ERR3439279 | Other | lineage4.9;La1.8 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR3439285 | Sensitive | lineage4.9 | None | ERR4024770 | Sensitive | lineage4.1.2.1 | None | ERR4188280 | Other | La1.8.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR5865378 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865379 | Pre-XDR-TB | lineage2.2.1 | None | ERR736867 | HR-TB | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR6865787 | Sensitive | lineage4.1.2.1 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR8773691 | HR-TB | lineage4.2.1 | None | ERR752034 | Sensitive | lineage2.2.1 | None | ERR8773690 | HR-TB | lineage4.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | SRR11349179 | MDR-TB | lineage2.2.1 | None | ERR9896150 | Sensitive | lineage3 | None | SRR10993944 | Other | La1.6 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1165277 | MDR-TB | lineage4.3.3 | None | SRR1165656 | MDR-TB | lineage4.1.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR1167285 | MDR-TB | lineage4.3.3 | None | SRR1167369 | MDR-TB | lineage4.1.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | SRR1173820 | MDR-TB | lineage4.1.2 | None | SRR1173542 | MDR-TB | lineage4.1.2 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972310 | Sensitive | lineage4.9 | None | SRR11972187 | MDR-TB | lineage2.2.1 | None | SRR14802194 | Sensitive | lineage4.3.3 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR15014652 | MDR-TB | lineage4.9 | None | SRR15368707 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR15508558 | Sensitive | lineage4.1.2.1 | None |
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