lineage | Count |
---|---|
lineage2.2.1 | 15 |
lineage4.9 | 39 |
lineage2.2.1.1 | 4 |
lineage1.1.1;lineage4 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage1.2.2.2 | 1 |
La1.7.1 | 1 |
La3;M.canetti;lineage4.9 | 1 |
lineage4 | 2 |
lineage4.2;lineage4.9 | 1 |
lineage4.5 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage1;lineage4.9 | 1 |
lineage4.1.1.3 | 1 |
La1.7;lineage4.9 | 2 |
spoligotype | Count |
---|---|
None | 76 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708392 | Other | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR22249470 | Sensitive | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR29097066 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR12420571 | Sensitive | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR12420311 | Sensitive | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR23691408 | RR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR12420683 | RR-TB | lineage2.2.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR12420740 | Sensitive | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None |
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