lineage | Count |
---|---|
15 | |
lineage4.9 | 58 |
lineage5.1.4 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.2.1 | 1 |
lineage4 | 13 |
lineage2.2.1 | 10 |
La1 | 1 |
lineage4.9;La1.3 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2 | 2 |
lineage4.5 | 1 |
lineage2.2.1.1 | 4 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 113 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675387 | Sensitive | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818929 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3283010 | Other | La1 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798431 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR22249470 | Sensitive | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR23691408 | RR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None |
---|